Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0316 ATGCCTCAGGAGAGTAGCTTATTAAGCTCAATTTTCGCATCTCCTGCATCAAAGAGGATATTGAATTTGAAGGGTTCGGTTTTTAACAATAGTGAGGTGAATGAGGAGATCAATGATTATGAATTAGCATACAGGAAAGCAGAGGAAGCAGCATCAAGGAGGAATGAAGCAGCAGAATGGCTTCGAGAAATGGACGAAGTGGCTTATTCATCACTCTCCAAACAACCTTCCGAAGAACAATTCTGTCTCGCTCTCCGCAATGGTCTCATTCTCTGCAACGTACTCAACAAAATCAATCCCGGTGCTATCCTCAAGGTGGTGGACAATCAAGTCCTTGCAGTTCACTCTCCAGAGGGACCAGCCCACTCTGCTATTCAGTATTTCGAAAACATGAAGAATTTTCTTGATGCTGTTAAGGATATGACCCTTTTGACCTTTGAAGCTTCTGATTTAGAAAAGGGTGGTTCATCAAGCAAAGTTGTAGACTGCATTCTTTGTTTGAAAGGGTATTATGAATGGAAGCTATCAGGTGGAGTTGGGGTTTGGAGGTATGGAGCAACTGTCAGGATTACTTCTTTCCACAAGGGAACTCCTTCTTCATTGGGCAGTGAAAGTGCTGATGAGTCCCTTGATGAATCTCAGTCCTCACAGTATGAACAGTTGGTTGAATTTCTTCGTATGTCTCAAGAGGTCTCAATCGAAGAAACCAGAACTGCTAGTGCTCTGGCTTTCCTGTTTGATCACTTTGGACTCAAACTTCTCCAGGCTTTCGTTAGAGAGATTGATGATGGGATTGAAGATCTACCGCTCAATGCAATGGTAATTGATACATTTCTCAGCAAGATAGTAAGGGATTTCTCCGCGTTACTTGTTTCTCAAGGCACTCAGCTTGCATTTTTCCTCAAGAAAATATTGAAAGGCGAGAATGGTTGTCTCTCTAAGAAAGAATTCATGGAAGCTATTGCATTATATCTTAATCAAAGAAGTAGTTTGTCGTCAAATGATTTATCTAAATTCTGCGTTTGTGGAGGAAAACGTGATAGTAGTGCTCAAAATAATGTCAAATTTTCATCCAAGTATGCTGAAATAATTGATGCGCAGCAGAAACAACTTGAGGGAATGAGATACTTACTAGAGGAGATAAGAAAGGAAGTCAAACAGATTCAATCTGAATGGGACCAAGAATCGAGCAGGCTCGAGAATCATATAAAGAGCCTTGAGGTGACCTCCTCTTCCTACCACAAAGTTTTAGAGGAGAATCGATCTCTTTACAATCAAGTGATAGACCTCAAAGGATCCATTAGGGTCTATTGTAGAGTGAGACCCTTCTTAGGTCAATCAAATGGACAATCTACAGTAGATTACATAGGAGAAAATGGAAACATAATGATCGTGAATCCCCTTAAGCAGGGAAAAGATGCTAGAAAAGTATTTTCATTCAATAAAGTGTTCGCAACTAATGCCACACAAGAACAAATATATTCCGATACAAAACCATTGGTTAGATCTGTTTTAGATGGCTATAACGCGTGCATCTTTGCATATGGACAGACTGGCTCAGGGAAGACCTACACGATGAGTGGTCCGGATCTGATGACCGAAGAGACATGGGGTGTTAACTATAGGGCTTTGCGTGACTTATTTCATATATCAAAGGAAAGAGCAGAAGCAATAAATTATGAAGTTTCCGTCCAAATGATCGAAATATACAATGAACAAGTGAGAGATCTATTAGTCAGTGATGGATCTAACAGAAGATTAGATATACGAAACAACTCTCAATTGAATGGTCTTAATGTGCCTGATGCATGTTTGGTTCCAGTTGGTTGTACTCAAGATGTTCTTGATTTAATGAAAATTGGTCAGAGGAACCGTGCGGTTGGTGCTACTGCTCTAAATGAGCGAAGCAGTCGTTCTCATAGTGTGTTGACTATTCATGTCAGAGGAAGGGACTTAGTTTCTAATTCAGTTCTTAAGGGTTGTCTTCATCTTGTCGATTTGGCTGGAAGTGAGAGAGTTGAGAAATCCGAGGCTGTCGGCGAGAGACTAAAGGAGGCACAGCATATTAATAAATCTCTTTCTGCACTTGGCGATGTTATCTCCTCTTTGGCGCAGAAAAGTCAACATATTCCTTACAGAAATAGCAAGCTTACACAAGTTTTACAAGATTCATTAGGTGGCCATGCAAAGACTTTGATGTTTGTTCATATAAATCCTGAAATCAATGCCATTGGGGAGACAATTAGCACATTGAAGTTTGCTGAGAGGGTTGCATCCATTGAACTTGGAGCTGCTAAATCTAACAAAGAAACCGGCGAAATCCGAGAGCTCAAGGAAGAGATATCAAATATCAAATTGGCATTGGAGAGGAAGGACACTGAACTGGAGCAATGGAAATCTGGAAATGCACGGAATGCTGCAGATTCTCAGAAACCAAGAGCCGTTTCACCTTTCCGTTTGCCCAAATATGGTAACAGTGGCGGCATGAAGCCTGAAAATAGTCAAAGATCCATTGATGATAGAAGCTCCGAGGCAAAAAGTTATTCTTCTGGTAAGCAACGAAGGTCGAGATTTCCATCAACATTTATCGACAAGGACTCCATACCAAAAATGTCTCTTCTGGCTGAAGAAAAGTCAGTGAGCTCAGGAAAGCATAGATCACCATCACCTCCAATCAGGAGATCAATATCCACCGATAGAGGTTCTGTCACTAAAAGCAAGATCAAAATTGACAATGCAGAAAACCAACCAATTTTGAAGCATCCATTTCTAGCTAGAGTACCAGTAAATAAATCTCTTGCAACAATGACACCATCTATAGACAATAATAACTCAAGGGTCTATGTACATTCACAAGAGCCGGTGAAGCACGATAACATTTCCGAACCTCTCATTAACTTCGAGAAAGTAAGCTTTAGGAAAGTTCATCAAGAACATGAAGAGGAACAGTCCAAACAACCATTTGGAGTAGTAAGGCAAGGAAGTGTAAGGAAAAACAAAGCTGACAATAACTTCAAGTCCAAGCGTCTTCAACAATCTCCCTTTAGGATTCAAAAGACCGATTTAATACCTAAATCTATTCCTGACATAGAAATTGCTGGCGAAATTGTGGAGGTACCTCGAAAGATTGATCTCTCTGAGCCAGAAAATGATTTTAACTTTATGCAGTCTGCAATCAATGGTGCATTAATTGTTCCAAAAAAACGTCGCAGCATCTCAAGGAATTCTCAGAACCTTGAACCAAGAGGAATTGTGCAAGGAGCTGAACCATTATTGTCTAGTAAAGTTGAAAACAAACTTTCAAACGGTCAAGGTCGTAATCTTAAGGAAGTCAATACATCCATGCATGAATTTAAAAGAAGCCGATCGACACCACGAGGAAAGTTTTTTGTTTTATGA 3399 0.4019 MPQESSLLSSIFASPASKRILNLKGSVFNNSEVNEEINDYELAYRKAEEAASRRNEAAEWLREMDEVAYSSLSKQPSEEQFCLALRNGLILCNVLNKINPGAILKVVDNQVLAVHSPEGPAHSAIQYFENMKNFLDAVKDMTLLTFEASDLEKGGSSSKVVDCILCLKGYYEWKLSGGVGVWRYGATVRITSFHKGTPSSLGSESADESLDESQSSQYEQLVEFLRMSQEVSIEETRTASALAFLFDHFGLKLLQAFVREIDDGIEDLPLNAMVIDTFLSKIVRDFSALLVSQGTQLAFFLKKILKGENGCLSKKEFMEAIALYLNQRSSLSSNDLSKFCVCGGKRDSSAQNNVKFSSKYAEIIDAQQKQLEGMRYLLEEIRKEVKQIQSEWDQESSRLENHIKSLEVTSSSYHKVLEENRSLYNQVIDLKGSIRVYCRVRPFLGQSNGQSTVDYIGENGNIMIVNPLKQGKDARKVFSFNKVFATNATQEQIYSDTKPLVRSVLDGYNACIFAYGQTGSGKTYTMSGPDLMTEETWGVNYRALRDLFHISKERAEAINYEVSVQMIEIYNEQVRDLLVSDGSNRRLDIRNNSQLNGLNVPDACLVPVGCTQDVLDLMKIGQRNRAVGATALNERSSRSHSVLTIHVRGRDLVSNSVLKGCLHLVDLAGSERVEKSEAVGERLKEAQHINKSLSALGDVISSLAQKSQHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEINAIGETISTLKFAERVASIELGAAKSNKETGEIRELKEEISNIKLALERKDTELEQWKSGNARNAADSQKPRAVSPFRLPKYGNSGGMKPENSQRSIDDRSSEAKSYSSGKQRRSRFPSTFIDKDSIPKMSLLAEEKSVSSGKHRSPSPPIRRSISTDRGSVTKSKIKIDNAENQPILKHPFLARVPVNKSLATMTPSIDNNNSRVYVHSQEPVKHDNISEPLINFEKVSFRKVHQEHEEEQSKQPFGVVRQGSVRKNKADNNFKSKRLQQSPFRIQKTDLIPKSIPDIEIAGEIVEVPRKIDLSEPENDFNFMQSAINGALIVPKKRRSISRNSQNLEPRGIVQGAEPLLSSKVENKLSNGQGRNLKEVNTSMHEFKRSRSTPRGKFFVL* 1133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0316 1132 PRINTS Kinesin heavy chain signature 507 528 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g0316 1132 PRINTS Kinesin heavy chain signature 630 647 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g0316 1132 PRINTS Kinesin heavy chain signature 661 679 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g0316 1132 PRINTS Kinesin heavy chain signature 710 731 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g0316 1132 MobiDBLite consensus disorder prediction 834 851 - -
Tpr4g0316 1132 MobiDBLite consensus disorder prediction 884 905 - -
Tpr4g0316 1132 SUPERFAMILY Calponin-homology domain, CH-domain 48 193 IPR036872 -
Tpr4g0316 1132 SMART ch_5 53 170 IPR001715 GO:0005515
Tpr4g0316 1132 SMART kinesin_4 431 768 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g0316 1132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 433 797 IPR027417 -
Tpr4g0316 1132 Coils Coil 364 398 - -
Tpr4g0316 1132 MobiDBLite consensus disorder prediction 876 905 - -
Tpr4g0316 1132 Coils Coil 767 794 - -
Tpr4g0316 1132 Pfam Calponin homology (CH) domain 52 172 IPR001715 GO:0005515
Tpr4g0316 1132 ProSiteProfiles Kinesin motor domain profile. 433 760 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g0316 1132 Gene3D Kinesin motor domain 375 762 IPR036961 -
Tpr4g0316 1132 PANTHER HEAVY CHAIN, PUTATIVE-RELATED 29 1128 - -
Tpr4g0316 1132 MobiDBLite consensus disorder prediction 799 863 - -
Tpr4g0316 1132 Coils Coil 30 50 - -
Tpr4g0316 1132 Gene3D - 43 172 IPR036872 -
Tpr4g0316 1132 PANTHER KINESIN-LIKE PROTEIN KLP-3 29 1128 - -
Tpr4g0316 1132 Pfam Kinesin motor domain 439 760 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g0316 1132 ProSiteProfiles Calponin homology (CH) domain profile. 51 172 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0316 Tpr-Chr4 3152783 3159938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0316 369 777 Calmodulin-binding Proteins AT5G65930 39.320 8.81e-78 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0316 K10406 - gmx:100786466 1670.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0316 4 3152783 3159938 Tpr4g0316 4 3152783 3159938 ECH