Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0294 ATGACATTCAAACGTAGGAATGGTGGTCGTAACAAACATGGTCGTGGCCATGTCAAATTCATTCGTTGTTCCAACTGTGGTAAATGCTGTCCCAAGGACAAGGCTATCAAGAGATTTTTGGTTAGGAACATTGTTGAACAAGCTGCTGTTAGAGATGTTCAGGAAGCTTGTGTCTATGACCAATACACTCTTCCCAAGCTGTATGTGAAGATGCAGTACTGTGTTTCATGTGCTATTCACTCTCATGTTGTGAGGGTTAGATCTCGCACCGATAGGAGGAAGCGTGACCCTCCACAGCGCTTCGTCAGGCGCAGGGATGACGCACCAAGGCCAGGTCAGCCTGGACAAGCGCCTCGCCCTGCTGTAGCTGGAGGAGCTCCCGTCCGTACCTAG 393 0.4987 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRFVRRRDDAPRPGQPGQAPRPAVAGGAPVRT* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0294 130 PANTHER 40S RIBOSOMAL PROTEIN S26 1 130 IPR000892 GO:0003735|GO:0005840|GO:0006412
Tpr4g0294 130 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Tpr4g0294 130 MobiDBLite consensus disorder prediction 86 130 - -
Tpr4g0294 130 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Tpr4g0294 130 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Tpr4g0294 130 PANTHER 40S RIBOSOMAL PROTEIN S26 1 130 - -
Tpr4g0294 130 MobiDBLite consensus disorder prediction 90 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0294 Tpr-Chr4 2962764 2964572 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0294 1 116 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 83.621 2.10e-69 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0294 K02976 - gmx:100305706 219.935