Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0267 ATGTCTACAAACTTGAAGAATCTTTCACTTTTTCACAAAATCTTTTCCCTCACTTTGCTGCTTTTTTCAATAAACTTTCTGTTCTTTCCATGTTGTAACTCTCTTGATGAACAAGGCCAAACTCTTATGGCATGGAAAGACAGTTTAAACATTACTTCAGATGCTTTAGCATCATGGAATCTTTCAAACCAAACACCATGCAATTGGTTTGGTGTAAAGTGCAATTTACAAGGAGAGGTAGAAGAGATAAATTTGCAGTCATTGAACTTACAAGGTTCATCATTGCCTTCAAATTTTCAACCTCTCAAATCCTTGAAGGTTCTTGTCCTCTCATCAACTAACATAACAGGAAGGATTCCAAAACAAATTGGAGATTATCAAGAGCTTGTTTTCATTGATCTCAGTGAAAATTCTCTCTTTGGTGAAATCCCAGAAGAAATTTGCAGGCTAAGCAAACTTCAAAATTTAGCTCTTCATTCAAACTCTCTTGAAGGAAACATTCCATTCAACATAGGAAATTTATCAAGTCTTGTGAACTTGACACTCTTTGACAATAAATTCAGTGGCGAAATTCCAAAGAGTATTGGTTCCTTAAGTAAGCTTCAAGTATTCAGAGCAGGAGGGAATTCAAACCTCAAGGGTGAGCTGCCATCAGAGATTGGAAACTGCACCGACTTGGTCATGTTAGGCCTCGCGGAAACCAGCATTTCAGGTAGTATTCCTTCTTCGATAGGGATGCTGAAAAAACTACAGACCATAGCCATTTACACAACTCAGTTGTCAGGCTCTATTCCAGAAGAGATAGGAAATTGCAGTGAGTTGCAGAATCTGTATTTGTATCAGAACTCAATTTCTGGTCCAATTCCACATCAAATTGGAGAGCTGAAGAAACTTCAGAGTCTACTTTTATGGCAAAACAATATGGCAGGGGCAATACCAGAAGAGCTTGGAAACTGCAGAGATCTCAGTGAGATAGATTTGTCAGAAAATCGTCTCACAGGTAGCATACCAATCAGTTTTGGAAAGCTATCAAATCTAAAAGGACTTCAGCTGAGTGTTAATCAACTGTCAGGTATTATACCACCTGAAATTTCAAACTGCAGTTCTTTGACTCAGCTTGAAGTTGACAACAATGCTATTTCTGGTGAGATTCCTTCTGATATTGGCAACTTGAGAAGCTTGACACTCTTCTATGCATGGAAGAATAAGCTAACAGGAAAAATCCCAAATAGTCTTTCCGAGTGCAAAGATCTTCAGTCACTTGATCTTTCATACAATAACTTAACTGGTTCAATACCAAAACAACTATTTGTGTTGAAAAATCTCACTCAACTTATGCTTCTTTCCAATGATTTGGAAGGATTCATACCAACTAATATCGGTAACTGCACAAGTCTCAATAGGTTGAGGTTAAATCAGAATAGACTAGTTGGTAATATTCCATCTGAGATTACCAACTTGAAAATTTTGAATTTTTTGGACTTGAACACCAATCATCTTGTAGGGGAGATTCCTTCAACATTATCAAGATGCCAAAATCTTGAGTTTATTGATCTCTCACACAACAAGCTCTCAGGGAATTTAGATGCACTTTCTAGCCTTCAGAATCTTGTTTCCTTAAATGTTTCCTTCAATGAATTCTCTGGTGAATTGCCTAACACAACATTGTTTAGGAAACTCCCTCTCAGTGATCTCACTGGAAATAAAGGTCTTCATATTTCTGAAGGTGTTGTAACTCCAGCAATCAGAACAAGAGCCAAAAGTCATGTTAGATTCGATATGGAGATTATATTGTTAATTCTCTTGAGCATCATTCTAGTACTAATACTTCTCACATTCTATGTCCTGGTACGTGACCATATTGCTGAGGAAGCATTCTGGAGAAATTTCAAAGCATCCAATATACCTTTGTATCAGGGGATGTTTGGATTCTCTATTGATAAAGTTGTCAAGAATTTCAAAGCATCCAATATCATTGACATTACAAGCTCTGGAATTTTGTACAAGATAACAATTCCAAATGGCAATATACTAGCAGTTAAAAAGATGTGGCCGGATTCTGGAGCCTTAAGTTCAGAAATTCAAATATTAAGTTCAATGAAACATAAGAATATCATCAAGATTCTTGGTTGGCGACCCTATAAGAATAGGATGCTGCAGTTTTATGAATATTTCCCTAGTCTGAGCTCATTGCTTCATGGTTCAGAAAAGGGAAAGTTAGATTGGGATACCAGGTTTGAAGTCATCCTAGGCCTAGCTCAAGCACTTGCATATTTGCATCATGATTGTGTGCCTTCTATATACCATGGAGATGTCAAAGCAACGAGTCTCTTATTAGGTCCTGGCTATCATCCTTACCTTGCCGACTTTGGCCTGGCAAGAATTGCAAGTGAAAAAGACGATGATGCTAAATCCAATCCAGTTCAAAGACCTCGCTACACTGCGAGTTCACATGGATACACAGATCCTGAGCTTGACTCAATGCAGAAAATCAATGAGAAAACCGACGTGTACAGTTTCGGCGTGATCCTACTTGAGGTGCTGACAGGAAGGCAACCATTAGATCCAACTCTGCCAAGAGGTGTACACTTGGTTCAATGGGTTAAGAATCACTTGTCTAGCAAAGGAAACCCATTAGAAATTCTTGACTCAAAGCTGAGAGAGAAGACTGAACTTACTTCTATGCATGAAATACTACAAACTCTAGCTGTTTCAATTTTATGTGTCAGTACAAAAGCTTGTGAACGTCCAACAATGAAAGACGCCATTGCAATGCTCAACCAATTTCGATATTTTGTTTAG 2802 0.379 MSTNLKNLSLFHKIFSLTLLLFSINFLFFPCCNSLDEQGQTLMAWKDSLNITSDALASWNLSNQTPCNWFGVKCNLQGEVEEINLQSLNLQGSSLPSNFQPLKSLKVLVLSSTNITGRIPKQIGDYQELVFIDLSENSLFGEIPEEICRLSKLQNLALHSNSLEGNIPFNIGNLSSLVNLTLFDNKFSGEIPKSIGSLSKLQVFRAGGNSNLKGELPSEIGNCTDLVMLGLAETSISGSIPSSIGMLKKLQTIAIYTTQLSGSIPEEIGNCSELQNLYLYQNSISGPIPHQIGELKKLQSLLLWQNNMAGAIPEELGNCRDLSEIDLSENRLTGSIPISFGKLSNLKGLQLSVNQLSGIIPPEISNCSSLTQLEVDNNAISGEIPSDIGNLRSLTLFYAWKNKLTGKIPNSLSECKDLQSLDLSYNNLTGSIPKQLFVLKNLTQLMLLSNDLEGFIPTNIGNCTSLNRLRLNQNRLVGNIPSEITNLKILNFLDLNTNHLVGEIPSTLSRCQNLEFIDLSHNKLSGNLDALSSLQNLVSLNVSFNEFSGELPNTTLFRKLPLSDLTGNKGLHISEGVVTPAIRTRAKSHVRFDMEIILLILLSIILVLILLTFYVLVRDHIAEEAFWRNFKASNIPLYQGMFGFSIDKVVKNFKASNIIDITSSGILYKITIPNGNILAVKKMWPDSGALSSEIQILSSMKHKNIIKILGWRPYKNRMLQFYEYFPSLSSLLHGSEKGKLDWDTRFEVILGLAQALAYLHHDCVPSIYHGDVKATSLLLGPGYHPYLADFGLARIASEKDDDAKSNPVQRPRYTASSHGYTDPELDSMQKINEKTDVYSFGVILLEVLTGRQPLDPTLPRGVHLVQWVKNHLSSKGNPLEILDSKLREKTELTSMHEILQTLAVSILCVSTKACERPTMKDAIAMLNQFRYFV* 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0267 933 Gene3D Phosphorylase Kinase; domain 1 639 724 - -
Tpr4g0267 933 ProSiteProfiles Protein kinase domain profile. 653 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g0267 933 SMART LRR_typ_2 487 511 IPR003591 -
Tpr4g0267 933 SMART LRR_typ_2 415 439 IPR003591 -
Tpr4g0267 933 SMART LRR_typ_2 295 319 IPR003591 -
Tpr4g0267 933 SMART LRR_typ_2 343 367 IPR003591 -
Tpr4g0267 933 SMART LRR_typ_2 102 126 IPR003591 -
Tpr4g0267 933 SMART LRR_typ_2 534 559 IPR003591 -
Tpr4g0267 933 SMART LRR_typ_2 150 174 IPR003591 -
Tpr4g0267 933 SUPERFAMILY RNI-like 82 358 - -
Tpr4g0267 933 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Tpr4g0267 933 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 517 932 - -
Tpr4g0267 933 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 519 - -
Tpr4g0267 933 SUPERFAMILY L domain-like 260 576 - -
Tpr4g0267 933 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 517 932 - -
Tpr4g0267 933 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 519 - -
Tpr4g0267 933 SUPERFAMILY Protein kinase-like (PK-like) 645 928 IPR011009 -
Tpr4g0267 933 Gene3D Transferase(Phosphotransferase) domain 1 726 931 - -
Tpr4g0267 933 ProSiteProfiles Leucine-rich repeat profile. 513 535 IPR001611 GO:0005515
Tpr4g0267 933 PRINTS Leucine-rich repeat signature 418 431 - -
Tpr4g0267 933 PRINTS Leucine-rich repeat signature 511 524 - -
Tpr4g0267 933 Pfam Protein kinase domain 672 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g0267 933 Pfam Leucine rich repeat 322 380 IPR001611 GO:0005515
Tpr4g0267 933 Gene3D Ribonuclease Inhibitor 298 577 IPR032675 -
Tpr4g0267 933 Gene3D Ribonuclease Inhibitor 192 291 IPR032675 -
Tpr4g0267 933 Gene3D Ribonuclease Inhibitor 35 191 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0267 Tpr-Chr4 2722252 2725782 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0267 95 932 Receptor kinase-like Gene Family AT5G56040 47.302 0.0 732
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr4g0267 Pkinase 2.3e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0267 - - cam:101492613 1369.37