Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr4g0267 | ATGTCTACAAACTTGAAGAATCTTTCACTTTTTCACAAAATCTTTTCCCTCACTTTGCTGCTTTTTTCAATAAACTTTCTGTTCTTTCCATGTTGTAACTCTCTTGATGAACAAGGCCAAACTCTTATGGCATGGAAAGACAGTTTAAACATTACTTCAGATGCTTTAGCATCATGGAATCTTTCAAACCAAACACCATGCAATTGGTTTGGTGTAAAGTGCAATTTACAAGGAGAGGTAGAAGAGATAAATTTGCAGTCATTGAACTTACAAGGTTCATCATTGCCTTCAAATTTTCAACCTCTCAAATCCTTGAAGGTTCTTGTCCTCTCATCAACTAACATAACAGGAAGGATTCCAAAACAAATTGGAGATTATCAAGAGCTTGTTTTCATTGATCTCAGTGAAAATTCTCTCTTTGGTGAAATCCCAGAAGAAATTTGCAGGCTAAGCAAACTTCAAAATTTAGCTCTTCATTCAAACTCTCTTGAAGGAAACATTCCATTCAACATAGGAAATTTATCAAGTCTTGTGAACTTGACACTCTTTGACAATAAATTCAGTGGCGAAATTCCAAAGAGTATTGGTTCCTTAAGTAAGCTTCAAGTATTCAGAGCAGGAGGGAATTCAAACCTCAAGGGTGAGCTGCCATCAGAGATTGGAAACTGCACCGACTTGGTCATGTTAGGCCTCGCGGAAACCAGCATTTCAGGTAGTATTCCTTCTTCGATAGGGATGCTGAAAAAACTACAGACCATAGCCATTTACACAACTCAGTTGTCAGGCTCTATTCCAGAAGAGATAGGAAATTGCAGTGAGTTGCAGAATCTGTATTTGTATCAGAACTCAATTTCTGGTCCAATTCCACATCAAATTGGAGAGCTGAAGAAACTTCAGAGTCTACTTTTATGGCAAAACAATATGGCAGGGGCAATACCAGAAGAGCTTGGAAACTGCAGAGATCTCAGTGAGATAGATTTGTCAGAAAATCGTCTCACAGGTAGCATACCAATCAGTTTTGGAAAGCTATCAAATCTAAAAGGACTTCAGCTGAGTGTTAATCAACTGTCAGGTATTATACCACCTGAAATTTCAAACTGCAGTTCTTTGACTCAGCTTGAAGTTGACAACAATGCTATTTCTGGTGAGATTCCTTCTGATATTGGCAACTTGAGAAGCTTGACACTCTTCTATGCATGGAAGAATAAGCTAACAGGAAAAATCCCAAATAGTCTTTCCGAGTGCAAAGATCTTCAGTCACTTGATCTTTCATACAATAACTTAACTGGTTCAATACCAAAACAACTATTTGTGTTGAAAAATCTCACTCAACTTATGCTTCTTTCCAATGATTTGGAAGGATTCATACCAACTAATATCGGTAACTGCACAAGTCTCAATAGGTTGAGGTTAAATCAGAATAGACTAGTTGGTAATATTCCATCTGAGATTACCAACTTGAAAATTTTGAATTTTTTGGACTTGAACACCAATCATCTTGTAGGGGAGATTCCTTCAACATTATCAAGATGCCAAAATCTTGAGTTTATTGATCTCTCACACAACAAGCTCTCAGGGAATTTAGATGCACTTTCTAGCCTTCAGAATCTTGTTTCCTTAAATGTTTCCTTCAATGAATTCTCTGGTGAATTGCCTAACACAACATTGTTTAGGAAACTCCCTCTCAGTGATCTCACTGGAAATAAAGGTCTTCATATTTCTGAAGGTGTTGTAACTCCAGCAATCAGAACAAGAGCCAAAAGTCATGTTAGATTCGATATGGAGATTATATTGTTAATTCTCTTGAGCATCATTCTAGTACTAATACTTCTCACATTCTATGTCCTGGTACGTGACCATATTGCTGAGGAAGCATTCTGGAGAAATTTCAAAGCATCCAATATACCTTTGTATCAGGGGATGTTTGGATTCTCTATTGATAAAGTTGTCAAGAATTTCAAAGCATCCAATATCATTGACATTACAAGCTCTGGAATTTTGTACAAGATAACAATTCCAAATGGCAATATACTAGCAGTTAAAAAGATGTGGCCGGATTCTGGAGCCTTAAGTTCAGAAATTCAAATATTAAGTTCAATGAAACATAAGAATATCATCAAGATTCTTGGTTGGCGACCCTATAAGAATAGGATGCTGCAGTTTTATGAATATTTCCCTAGTCTGAGCTCATTGCTTCATGGTTCAGAAAAGGGAAAGTTAGATTGGGATACCAGGTTTGAAGTCATCCTAGGCCTAGCTCAAGCACTTGCATATTTGCATCATGATTGTGTGCCTTCTATATACCATGGAGATGTCAAAGCAACGAGTCTCTTATTAGGTCCTGGCTATCATCCTTACCTTGCCGACTTTGGCCTGGCAAGAATTGCAAGTGAAAAAGACGATGATGCTAAATCCAATCCAGTTCAAAGACCTCGCTACACTGCGAGTTCACATGGATACACAGATCCTGAGCTTGACTCAATGCAGAAAATCAATGAGAAAACCGACGTGTACAGTTTCGGCGTGATCCTACTTGAGGTGCTGACAGGAAGGCAACCATTAGATCCAACTCTGCCAAGAGGTGTACACTTGGTTCAATGGGTTAAGAATCACTTGTCTAGCAAAGGAAACCCATTAGAAATTCTTGACTCAAAGCTGAGAGAGAAGACTGAACTTACTTCTATGCATGAAATACTACAAACTCTAGCTGTTTCAATTTTATGTGTCAGTACAAAAGCTTGTGAACGTCCAACAATGAAAGACGCCATTGCAATGCTCAACCAATTTCGATATTTTGTTTAG | 2802 | 0.379 | MSTNLKNLSLFHKIFSLTLLLFSINFLFFPCCNSLDEQGQTLMAWKDSLNITSDALASWNLSNQTPCNWFGVKCNLQGEVEEINLQSLNLQGSSLPSNFQPLKSLKVLVLSSTNITGRIPKQIGDYQELVFIDLSENSLFGEIPEEICRLSKLQNLALHSNSLEGNIPFNIGNLSSLVNLTLFDNKFSGEIPKSIGSLSKLQVFRAGGNSNLKGELPSEIGNCTDLVMLGLAETSISGSIPSSIGMLKKLQTIAIYTTQLSGSIPEEIGNCSELQNLYLYQNSISGPIPHQIGELKKLQSLLLWQNNMAGAIPEELGNCRDLSEIDLSENRLTGSIPISFGKLSNLKGLQLSVNQLSGIIPPEISNCSSLTQLEVDNNAISGEIPSDIGNLRSLTLFYAWKNKLTGKIPNSLSECKDLQSLDLSYNNLTGSIPKQLFVLKNLTQLMLLSNDLEGFIPTNIGNCTSLNRLRLNQNRLVGNIPSEITNLKILNFLDLNTNHLVGEIPSTLSRCQNLEFIDLSHNKLSGNLDALSSLQNLVSLNVSFNEFSGELPNTTLFRKLPLSDLTGNKGLHISEGVVTPAIRTRAKSHVRFDMEIILLILLSIILVLILLTFYVLVRDHIAEEAFWRNFKASNIPLYQGMFGFSIDKVVKNFKASNIIDITSSGILYKITIPNGNILAVKKMWPDSGALSSEIQILSSMKHKNIIKILGWRPYKNRMLQFYEYFPSLSSLLHGSEKGKLDWDTRFEVILGLAQALAYLHHDCVPSIYHGDVKATSLLLGPGYHPYLADFGLARIASEKDDDAKSNPVQRPRYTASSHGYTDPELDSMQKINEKTDVYSFGVILLEVLTGRQPLDPTLPRGVHLVQWVKNHLSSKGNPLEILDSKLREKTELTSMHEILQTLAVSILCVSTKACERPTMKDAIAMLNQFRYFV* | 934 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr4g0267 | 933 | Gene3D | Phosphorylase Kinase; domain 1 | 639 | 724 | - | - | |
Tpr4g0267 | 933 | ProSiteProfiles | Protein kinase domain profile. | 653 | 930 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr4g0267 | 933 | SMART | LRR_typ_2 | 487 | 511 | IPR003591 | - | |
Tpr4g0267 | 933 | SMART | LRR_typ_2 | 415 | 439 | IPR003591 | - | |
Tpr4g0267 | 933 | SMART | LRR_typ_2 | 295 | 319 | IPR003591 | - | |
Tpr4g0267 | 933 | SMART | LRR_typ_2 | 343 | 367 | IPR003591 | - | |
Tpr4g0267 | 933 | SMART | LRR_typ_2 | 102 | 126 | IPR003591 | - | |
Tpr4g0267 | 933 | SMART | LRR_typ_2 | 534 | 559 | IPR003591 | - | |
Tpr4g0267 | 933 | SMART | LRR_typ_2 | 150 | 174 | IPR003591 | - | |
Tpr4g0267 | 933 | SUPERFAMILY | RNI-like | 82 | 358 | - | - | |
Tpr4g0267 | 933 | Pfam | Leucine rich repeat N-terminal domain | 36 | 75 | IPR013210 | - | |
Tpr4g0267 | 933 | PANTHER | LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN | 517 | 932 | - | - | |
Tpr4g0267 | 933 | PANTHER | LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN | 2 | 519 | - | - | |
Tpr4g0267 | 933 | SUPERFAMILY | L domain-like | 260 | 576 | - | - | |
Tpr4g0267 | 933 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 517 | 932 | - | - | |
Tpr4g0267 | 933 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 2 | 519 | - | - | |
Tpr4g0267 | 933 | SUPERFAMILY | Protein kinase-like (PK-like) | 645 | 928 | IPR011009 | - | |
Tpr4g0267 | 933 | Gene3D | Transferase(Phosphotransferase) domain 1 | 726 | 931 | - | - | |
Tpr4g0267 | 933 | ProSiteProfiles | Leucine-rich repeat profile. | 513 | 535 | IPR001611 | GO:0005515 | |
Tpr4g0267 | 933 | PRINTS | Leucine-rich repeat signature | 418 | 431 | - | - | |
Tpr4g0267 | 933 | PRINTS | Leucine-rich repeat signature | 511 | 524 | - | - | |
Tpr4g0267 | 933 | Pfam | Protein kinase domain | 672 | 922 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr4g0267 | 933 | Pfam | Leucine rich repeat | 322 | 380 | IPR001611 | GO:0005515 | |
Tpr4g0267 | 933 | Gene3D | Ribonuclease Inhibitor | 298 | 577 | IPR032675 | - | |
Tpr4g0267 | 933 | Gene3D | Ribonuclease Inhibitor | 192 | 291 | IPR032675 | - | |
Tpr4g0267 | 933 | Gene3D | Ribonuclease Inhibitor | 35 | 191 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr4g0267 | Tpr-Chr4 | 2722252 | 2725782 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr4g0267 | 95 | 932 | Receptor kinase-like Gene Family | AT5G56040 | 47.302 | 0.0 | 732 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Tpr4g0267 | Pkinase | 2.3e-24 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr4g0267 | - | - | cam:101492613 | 1369.37 |