Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0261 ATGAATAATAAGTTGGTTGAAGATTTAATGGAGTGTTCATCCGAGGTTCATTTTTCTGGATTTCATATGGAGGGATTAGAGGAAAGAAAAGCTGGAACTGAAGAACCGACCACTTCCGCGATTGACGAGTATAAACAACCTTTTGTTATAGGTGTTGCTGGGGGATCGGCATCTGGAAAGACAGCAGTATGTGATATGATTATTCAACAGCTTCATGATCAGCGGGTTGTACTTGTTAATCAGGATTCTTTTTACCATAACTTGACTGAGGAGGAACTTAAAAGAGTACAGGAATACAACTTTGACCATCCTGAAGCTTTTGATACTGAGCGATTGGTATCTGTCCTGGACAAATTGAAGCATAGCCAAGCAGTAGATATTCCGAAGTATGACTTTAAGGGTTACAAGAATAATGTGTTTCCCGCAAGAAGGGTAAACCCTGCAGATGTTATAATTTTGGAAGGCATCCTTGTTTTCCATGATCCACGTGTGAGGGCATTGATGAATATGAAGATATTTGTTGACACAGATGCTGATGTTCGTCTGGCAAGAAGGATCAAGCGTGATACTGCCGATAATGCTCGTAATATTGAAGCAGTGCTTGATCAGTATTCAAAATTTGTGAAACCGGCTTTTGATGACTTTATCCTTCCTACAAAGAAGTATGCTGATATCATTATACCCCGTGGAGGAGATAATCACGTGGCTATTGATTTGATTGTGCAGCATATTCGCACAAAGCTTGGCCAGCATGACCTCTGTAAAATATATCCTAACTTATATGTCATTCAGTCTACTTTTCAGATACGGGGCATGCACACCCTGATACGCGATTCTCAGACAAAGAAGCATGACTTTGTATTTTACGCTGACCGTTTGATTCGTTTGGTCGTAGAACATGGCCTAGGGCATCTTCCATTTACAGAAAAGCAAGTAATCACTCCTACGGGGTCTGTATACAGTGGTGTGGATTTTTGTAAGAGGCTGTGTGGTGTCTCCATTATCAGGAGTGGGGAAAGCATGGAGAATGCTTTGCGAGCATGCTGCAAAGGTATCAAAATTGGTAAAATTCTTATTCATAGAGAAGGTGACAACGGTCAGCAGCTAATATATGAGAAGTTGCCAAATGATATCTCAGATAGGCACGTGTTACTGCTGGATCCTATCTTAGGCACAGGTAATTCTGCCGTCCAAGCAATTTCTTTACTTTTAAAGAAGGGTGTACCAGAGTCCAACATTATATTTCTCAACCTCATATCAGCACCTCAAGGTGTGCATGTGGTCTGCAAAAGATTTCCGAGGATAAAAATTGTGACATCTGAGATTGACATTGGTTTGAATGAAGATTTCCGTGTCATTCCTGGGATGGGAGAGTTTGGGGATCGGTACTTTGGAACAGATGATGATGATGAGCAAGTGGAGAGCCGTTCGAGGTAG 1437 0.4134 MNNKLVEDLMECSSEVHFSGFHMEGLEERKAGTEEPTTSAIDEYKQPFVIGVAGGSASGKTAVCDMIIQQLHDQRVVLVNQDSFYHNLTEEELKRVQEYNFDHPEAFDTERLVSVLDKLKHSQAVDIPKYDFKGYKNNVFPARRVNPADVIILEGILVFHDPRVRALMNMKIFVDTDADVRLARRIKRDTADNARNIEAVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQIRGMHTLIRDSQTKKHDFVFYADRLIRLVVEHGLGHLPFTEKQVITPTGSVYSGVDFCKRLCGVSIIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLLKKGVPESNIIFLNLISAPQGVHVVCKRFPRIKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGTDDDDEQVESRSR* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0261 478 Gene3D - 43 250 IPR027417 -
Tpr4g0261 478 PANTHER URIDINE KINASE 16 469 - -
Tpr4g0261 478 Pfam Phosphoribulokinase / Uridine kinase family 49 235 IPR006083 GO:0005524|GO:0016301
Tpr4g0261 478 CDD UMPK 49 247 IPR000764 -
Tpr4g0261 478 TIGRFAM udk: uridine kinase 45 247 IPR000764 -
Tpr4g0261 478 CDD PRTases_typeI 324 439 IPR000836 -
Tpr4g0261 478 SUPERFAMILY PRTase-like 250 467 IPR029057 -
Tpr4g0261 478 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 240 IPR027417 -
Tpr4g0261 478 Gene3D - 251 466 IPR029057 -
Tpr4g0261 478 PRINTS Uridine kinase signature 47 64 - -
Tpr4g0261 478 PRINTS Uridine kinase signature 77 88 - -
Tpr4g0261 478 PRINTS Uridine kinase signature 122 137 - -
Tpr4g0261 478 PRINTS Uridine kinase signature 179 189 - -
Tpr4g0261 478 PRINTS Uridine kinase signature 193 204 - -
Tpr4g0261 478 PRINTS Uridine kinase signature 215 228 - -
Tpr4g0261 478 PANTHER URIDINE KINASE 16 469 - -
Tpr4g0261 478 Pfam Uracil phosphoribosyltransferase 265 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0261 Tpr-Chr4 2678153 2684459 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0261 1 469 PRT Gene Family AT4G26510 83.510 0.0 808
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0261 K00876 - gmx:100798205 889.026