Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0257 ATGAATGATTATGCATACAAAGTTGAAAGAATGAATCGCTTAATTCAATGGAGAGTTCATAATTTATCAACATGCACTTATATGAAAGCTGATCCATTCAAAATAGCTATGTGGAATTGGCATTTATCAATGGAAAAGAATTGTGGTTTACGTATTGAATTATATCCAGAAATTTCCAAAGAAAATTCTTATCCAATTGCATCTTTCATAATTAGTATTTATGGTGGAAATAGCAAAATCTTGACTCAATCAGAAATAAAAGATAAAGTTCTTAGCAACAAGGATTGTTTTGTTTGGGAGATTGAGGTTCCATTACCTGGAAAATTTATAATTGACATTGAGTTTCTTGATTTGAAAACTACATGTACAAAGGGTGGAGAAGCTTGTTCCATTTGGTCTAATGGATTTATACAGAAAATACAAAATGCAACGGCCCTTGAATCGCTTGGTCGAATGATAAGAGAAGGTGTTTATACAGACATAACAATCAACGTTAATTCCGAGGGAAGCATAAAAGCTCATCGAGCTATTCTTGCTTCACAATCACCTGTTTTTCGCAGCATGTTTTCGCATAATGTTAAGGAGACCGATTTGTCTACCATAAACATCGAAGACATGTCAATCGAAGCTTGTCAAACATTTATAAATTTTCTTTATGGAACTGTCAATGATGATGAATTTCTTATGCATAGACTAGACCTATTGCACGCCGCAGATAAGTACGATATTTATGACTTGAGAGAGGCGTGTGAAAAGAGTCTTCAAGAAGACATTGATGCGAAAAATGTACTCGAGAGACTTCAACTTGCATCTTTCTATCGGTTAACAAAGCTGAAGATTAGTTGTATGCAATATCTTGTAAAATTTGGTAAAATATATGATGTTCAAGGTGATTTAACTACCTTCTTGCAAACTGCAGATAGAGATTTGATTTGTGAAGTCTTTCACGAAATTCTTGATGCATGCAAAAAGTAA 975 0.3354 MNDYAYKVERMNRLIQWRVHNLSTCTYMKADPFKIAMWNWHLSMEKNCGLRIELYPEISKENSYPIASFIISIYGGNSKILTQSEIKDKVLSNKDCFVWEIEVPLPGKFIIDIEFLDLKTTCTKGGEACSIWSNGFIQKIQNATALESLGRMIREGVYTDITINVNSEGSIKAHRAILASQSPVFRSMFSHNVKETDLSTINIEDMSIEACQTFINFLYGTVNDDEFLMHRLDLLHAADKYDIYDLREACEKSLQEDIDAKNVLERLQLASFYRLTKLKISCMQYLVKFGKIYDVQGDLTTFLQTADRDLICEVFHEILDACKK* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0257 324 CDD BTB_POZ_ZBTB_KLHL-like 158 241 - -
Tpr4g0257 324 Pfam BTB/POZ domain 154 256 IPR000210 GO:0005515
Tpr4g0257 324 PANTHER OS08G0495500 PROTEIN-RELATED 1 323 IPR044714 -
Tpr4g0257 324 SUPERFAMILY POZ domain 144 256 IPR011333 -
Tpr4g0257 324 Gene3D Potassium Channel Kv1.1; Chain A 134 288 IPR011333 -
Tpr4g0257 324 ProSiteProfiles BTB domain profile. 159 219 IPR000210 GO:0005515
Tpr4g0257 324 PANTHER OS08G0495500 PROTEIN 1 323 - -
Tpr4g0257 324 SMART BTB_4 159 258 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0257 Tpr-Chr4 2653894 2655501 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Tpr4g0257 BTB 4e-24 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0257 K10523 - gmx:100790186 430.639