Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0256 ATGTCTTCATTGTTTCAAAGAGTCGTCTTGTTGTGTGTGTTAACTTTGCTATCAGTGCACAATATTCACGGGGTTCATGATAACTCTATAGATCTTTTTAGAACTCATGTGAATGTTGTTAACACTTTAGAAGATAATTTGGACTTAACTCTTCATTGTAAATCTAAAGATGATGATCTCGGAGAACATCTTCTACATCAAAACGATAGCTTTAGTTGGAGTTTTCGCCCTAAATGGCCCATTGGCACAACACTGTTCTTTTGTTCCTTTGCATGGACTGGTGAATTTCATTATTTTGATATATTCATAGATGGTGATAGCGGTAGAACTGATTCTGATGATTGCAATTGGAATGTTCACAAATCAGGACCATGCAGAATTCCAGATCATGGGGAACCTATTTGCTTTCCATGGAATAAGGGTATCAAATAA 432 0.3611 MSSLFQRVVLLCVLTLLSVHNIHGVHDNSIDLFRTHVNVVNTLEDNLDLTLHCKSKDDDLGEHLLHQNDSFSWSFRPKWPIGTTLFFCSFAWTGEFHYFDIFIDGDSGRTDSDDCNWNVHKSGPCRIPDHGEPICFPWNKGIK* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0256 143 PANTHER LEGUMINOSIN GROUP486 SECRETED PEPTIDE 6 136 - -
Tpr4g0256 143 Pfam Plant self-incompatibility protein S1 36 138 IPR010264 -
Tpr4g0256 143 PANTHER - 6 136 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0256 Tpr-Chr4 2651270 2651701 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0256 11 139 Carbohydrate Esterase AT3G16970 35.766 5.21e-22 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0256 - - mtr:MTR_4g094455 143.665