LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr4g0255	ATGCATCAATTGCATACAACAAGGTCATGGGAATTTCTTGGACTAGAAGGAAATAGAATACTTCCTAAGTACTCCATTTGGGAGAAGGCAAGATATGGTGATGATACAATCATTGGTAACCTTGATACAGGTGTATGGCCTGAATCTCAGAGCTTTAGTGACCAAGGAATGAGCCCTATTCCATCAAAATGGCGCGGAAATGGGATATGCCAAATCGACAATTTTATTGACTCCAACAAAACTTATTGCAACAGGAAGCTTATAGGAGCAAGATTTTTCTACAAAGGTTATGAGGCATATGCAGGAAAACTCGGTGCATTATTTTACACCGCACGGGACACGATAGGTCATGGTTCTCACACACTATCAACAGCTGGAGGTAATTTTGTTCAAGGAGTAAGTGTTTTGGGCAATGGTAATGGCACTGCCAAAGGTGGATCTCCGAAGGCTCGTGTTGCGGCCTACAAAGTGTGTTGGCTACTTGGCTGCAATGACGCAGATATCTTAGCAGGTTTTGAGGCTGCCATAAGTGATGGTGTTGATGTGCTTTCAGTTTCTCTTGGAGGAAAGACTAAAAATCTGTTTACAGATTCAGTTGCTATAGGTTCCTTCCATGCAGTTGCAAATAGTATAGTAGTAGTTAGTTCTGCTGGAAATGATGGACCCTATTTTGGAACTGTTGTAAATACGGCACCTTGGTTATTCACTGTTGCCGCTAGCACAATTGATAGAGACTTCACCAGTTATGTTAAACTAGGTGACAACACGTACATTAAGGGAACAAGTCTTTCATCTAAGGACTTGCCATCCCGCGAGTTCTATCCTTTGATTAGTGCTAAAGAAGCCAAACATTTCTATGTTATATCTAGAGAAGCCAAGTTCTGCAGACATGGAACACTTGATGTCGAAAAGGTGATGGGAAAAATAGTGGTATGCCTTGAAGATGAATTATTTGGAATTGCTAATGCAGGTGAAGAAGCTTCTTCAGCAGGAGCAGTAGGAATGATTTTGGCTAGTGATTATAAAAGCTTTTATGATTTTACTGCATACCCTCATGTTTTACCTACTTCACATGTCAATTATTCTGATGGTCAATATATTTATTCCTACATCCAAAGTGAAAATAACCCTGTTGCTTACATAACAAAAGCAATAACAGAATTTCCAATTATTCCAGCTCCAGTGATTGCTTCATTTTCATCAAGGGGACCTAGCACAATTCTTCCATCAATTCTAAAACCTGATATCACTGCACCTGGAGTGAACATAATTGCTGCTTACTCAGAAGCCACAAGTGTATTTGGAATAGAATCAAATAATAGGATTCCATATAATTCCTTTTCTGGAACTTCTATGTCATGCCCTCATGTGTCTGGCATAGTAGGTCTTCTCAAAACACTTCATCCTGAATGGAGTCCAGCAGCTATCAAATCAGCAATTATGACCACTGCAAGCAAAACGGACAACAGCAAAAGACCTATCAAGGATCGATTCTACGAAAATGCAACTCCATTTGCATATGGTTCGGGTCACATTCAGCCTGATCTTGCTATAGACCCTGGACTAATTTACGATCTTAATGTGGTAGATTACTTAAACCTATTATGTGGTTATAATCAAAGCCATAAACAAATTAAGGCTATTTACAACAAGCCTTTCATTTGTCCAAAGTCCTACAATGTGTTGGATTTCAACTACCCTACAATCACAATACTTGATCTCGAGGACAAAACCGTAAATGTTAGTCGAACTGTTACAAATGTTGGACGTCCAAGTACATATATCATGCAATCCAAGGCACCTGATGGAGTTTCAGTTGTGGTTGAGCCAAGTTACTTGAGCTTTAAGAAAGTTGGTGAGAAAAAATCATTCAAGGTTATTGTGATGAAAACTATGGATAATGGTGATGATGTTTCTACTACATTGGATTATGTATTTGGGGAATTATTGTGGACAAATGGAAATCATAGAGTAAGGAGTACTATTGCAGTGAAGTTCAAGTAG	2004	0.3902	MHQLHTTRSWEFLGLEGNRILPKYSIWEKARYGDDTIIGNLDTGVWPESQSFSDQGMSPIPSKWRGNGICQIDNFIDSNKTYCNRKLIGARFFYKGYEAYAGKLGALFYTARDTIGHGSHTLSTAGGNFVQGVSVLGNGNGTAKGGSPKARVAAYKVCWLLGCNDADILAGFEAAISDGVDVLSVSLGGKTKNLFTDSVAIGSFHAVANSIVVVSSAGNDGPYFGTVVNTAPWLFTVAASTIDRDFTSYVKLGDNTYIKGTSLSSKDLPSREFYPLISAKEAKHFYVISREAKFCRHGTLDVEKVMGKIVVCLEDELFGIANAGEEASSAGAVGMILASDYKSFYDFTAYPHVLPTSHVNYSDGQYIYSYIQSENNPVAYITKAITEFPIIPAPVIASFSSRGPSTILPSILKPDITAPGVNIIAAYSEATSVFGIESNNRIPYNSFSGTSMSCPHVSGIVGLLKTLHPEWSPAAIKSAIMTTASKTDNSKRPIKDRFYENATPFAYGSGHIQPDLAIDPGLIYDLNVVDYLNLLCGYNQSHKQIKAIYNKPFICPKSYNVLDFNYPTITILDLEDKTVNVSRTVTNVGRPSTYIMQSKAPDGVSVVVEPSYLSFKKVGEKKSFKVIVMKTMDNGDDVSTTLDYVFGELLWTNGNHRVRSTIAVKFK*	668

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr4g0255	667	PANTHER	SUBTILISIN-LIKE PROTEASE SBT5.3	2	664	-	-
	Tpr4g0255	667	SUPERFAMILY	Subtilisin-like	4	522	IPR036852	GO:0004252\|GO:0006508
	Tpr4g0255	667	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	2	664	IPR045051	-
	Tpr4g0255	667	Pfam	PA domain	291	366	IPR003137	-
	Tpr4g0255	667	Pfam	Subtilase family	33	495	IPR000209	GO:0006508\|GO:0008236
	Tpr4g0255	667	Gene3D	-	243	388	-	-
	Tpr4g0255	667	PRINTS	Subtilisin serine protease family (S8) signature	33	52	IPR015500	-
	Tpr4g0255	667	PRINTS	Subtilisin serine protease family (S8) signature	113	126	IPR015500	-
	Tpr4g0255	667	PRINTS	Subtilisin serine protease family (S8) signature	448	464	IPR015500	-
	Tpr4g0255	667	CDD	Peptidases_S8_3	2	485	IPR034197	-
	Tpr4g0255	667	ProSitePatterns	Serine proteases, subtilase family, serine active site.	449	459	IPR023828	-
	Tpr4g0255	667	Gene3D	Peptidase S8/S53 domain	35	531	IPR036852	GO:0004252\|GO:0006508
	Tpr4g0255	667	CDD	PA_subtilisin_like	249	381	-	-
	Tpr4g0255	667	Gene3D	-	535	666	-	-
	Tpr4g0255	667	Pfam	Fibronectin type-III domain	563	664	IPR041469	-
	Tpr4g0255	667	ProSiteProfiles	Serine proteases, subtilase domain profile.	9	518	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr4g0255	Tpr-Chr4	2642337	2646948	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr4g0255	3	666	Subtilisin-like Serine Gene Family	AT2G04160	54.086	0.0	699

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr4g0255	-		-	qsu:112012946	768.074