Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0226 ATGAATCCCTTCAAACCAACCCTCTTCATTCTTTTCACCACCTTCATTCTCACCGCCGGTAACATCCAACTAGACTTCCCTTATTTCACCACCACCAACACCGCCACAAACATCACCTTCATCGGTGATTCATCTCTCAGAAACCGCTTTGTTTCTTTAACTAAATCCACCACTTTCAGCACCGGTTCTATCATCTATAACAAACCCATTTCTCTCTTTGACATTTTAACAAACACTACATCTTCATTCTCAACAACGTTCTCTTTCTCCATCACAAACCCTAATAACCCCACTTCATTTGGTGATGGCATTGCTTTCTTCCTCTCCCCCAACAATCTCTCATCATTATCATCATCGTCATCAGCAAGCACATTTGGTCTTCCTACAAATTTTGTTGCTGTTGAATTTGATACTCGATTTGACCGTCGATTCAATGACCCGAATGAGAATCATATAGGTTTCAATATTGATACATTGAATTCTATGAAAATTGTTGATCCTATTTACAATGGAATTGATCTGAAGAGTGGAAATACTATCACTTCTTGGATTGATTACAAGACTGATGTGAATTCTCTTTCTGTTTTCTTGAGCTATTCTCCGATTAAGCCGCGTGATCCGATTCTTTTTGTAACCGTTGATCTTTCGGAGTATTTTAGAGGAAATGACGGTGTTTACGTTGGTTTTTCTGCTTCTGCTGAAAAAAGTACTGAACTTCATCAGATTCAAAGTTGGAGTTTTTACACTGTTGGATTTGAACCTGCAAGACCTAGGTTGAGGAGTCATAATGTTTCGGATAATTCTGTTACTGTAAGTACTGGGAATGAGGTACACGTTAATGCGTCGCGTCCACGTTCGCGTTCGCATTCTTTTTCTTCGAAGAAAAGGTTTGGTCTTGGTTTTGCTGTTGCAGGTCCTGTTTTTTTCTGTGTTGTTTTTTCATTGTTGGGGTATTATTCTTTTATGAAATGGAAGGGAGTGAGAAAATGTACGTTGAAGAATTTCGGAACTGGGTTTGTTGCTTGTCCTAGAGAGTTTAATTACAGAGAATTGAAATCTGCGACACGAGAGTTTCATCCTAGTAGGATCGTTGGTCATGGTTCGTTTGGTACTGTGTATAAAGCTTTCTTTATATCTTCTGGAACAATTGCTGCAGTGAAAAGATCAAGGCATTCTCATGAAGGAAAAGCCGAGTTTCATTCTGAATTGTCTATCATTGCTGGTTTAAGGCACAAAAATTTGGTTCAGTTGTTAGGTTGGTGTGTTGAGAAAGGAGAGTTGCTTCTTGTTTATGATTTCATGCCTAATGGAAGCTTAGACAAGATGCTTTACAAGGAACCTGAGAGAGGGAAATTGTTGAGTTGGTCTCATAGGGTTAACATTGTTGTTGGTTTGGCTTCTGTTTTGGTTTATCTTCATCAAGAATGTGAGCAAAGAGTGATTCATAGAGATATCAAAACTGCGAATGTTTTGCTCGATGGGAATTTCAATCCTAGGTTGGGTGATTTTGGATTGGCTAAACTCATGGATCATGATAAGAGTCCTATTTCAACTTTAACTGCTGGAACAATGGGATACCTTGCACCTGAATATCTTCAATACGGGAAAGCAACCGATAAAACCGATGTTTTCAGCTATGGAGTGGTTGTCCTTGAAGTGGCTTGTGGGAAGAGACCTATTGAAAGAGAAGGTACAAAGATGGTTAATTTGGTGGATTGGGTTTGGGGGTTGTATTCTGAAGGGAAGATAATTGAAGCTGTTGATAAGAGGTTGAATGGTGAATTTGAGGAAGAGGAAATGAAGAAGGTTTTGATGTTAGGGTTGAGTTGTGCTAATCCTGATAGTGCTGAGAGACCTACTATGAGAAGAGTATTGCAGATTCTTAACAATGAAGCTGTTCCATTTACTGTTCCAAAAGTGAAGCCATGCCTTACATTCTCATCTGATTTGCCATTGACTATTGATGAGATTGTTTCTGATGTTGATGATGGTGAGGGTGAAGAGTTCAATACTAGCCAATCTATGTGTGAGATTAAAATTGAAGGATAA 2049 0.389 MNPFKPTLFILFTTFILTAGNIQLDFPYFTTTNTATNITFIGDSSLRNRFVSLTKSTTFSTGSIIYNKPISLFDILTNTTSSFSTTFSFSITNPNNPTSFGDGIAFFLSPNNLSSLSSSSSASTFGLPTNFVAVEFDTRFDRRFNDPNENHIGFNIDTLNSMKIVDPIYNGIDLKSGNTITSWIDYKTDVNSLSVFLSYSPIKPRDPILFVTVDLSEYFRGNDGVYVGFSASAEKSTELHQIQSWSFYTVGFEPARPRLRSHNVSDNSVTVSTGNEVHVNASRPRSRSHSFSSKKRFGLGFAVAGPVFFCVVFSLLGYYSFMKWKGVRKCTLKNFGTGFVACPREFNYRELKSATREFHPSRIVGHGSFGTVYKAFFISSGTIAAVKRSRHSHEGKAEFHSELSIIAGLRHKNLVQLLGWCVEKGELLLVYDFMPNGSLDKMLYKEPERGKLLSWSHRVNIVVGLASVLVYLHQECEQRVIHRDIKTANVLLDGNFNPRLGDFGLAKLMDHDKSPISTLTAGTMGYLAPEYLQYGKATDKTDVFSYGVVVLEVACGKRPIEREGTKMVNLVDWVWGLYSEGKIIEAVDKRLNGEFEEEEMKKVLMLGLSCANPDSAERPTMRRVLQILNNEAVPFTVPKVKPCLTFSSDLPLTIDEIVSDVDDGEGEEFNTSQSMCEIKIEG* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0226 682 PANTHER - 32 648 - -
Tpr4g0226 682 Pfam Legume lectin domain 23 254 IPR001220 GO:0030246
Tpr4g0226 682 SUPERFAMILY Protein kinase-like (PK-like) 342 650 IPR011009 -
Tpr4g0226 682 SUPERFAMILY Concanavalin A-like lectins/glucanases 13 251 IPR013320 -
Tpr4g0226 682 Pfam Protein kinase domain 359 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g0226 682 ProSiteProfiles Protein kinase domain profile. 358 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g0226 682 Gene3D - 21 268 - -
Tpr4g0226 682 Gene3D Transferase(Phosphotransferase) domain 1 434 637 - -
Tpr4g0226 682 Gene3D Phosphorylase Kinase; domain 1 328 433 - -
Tpr4g0226 682 ProSitePatterns Protein kinases ATP-binding region signature. 364 387 IPR017441 GO:0005524
Tpr4g0226 682 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 32 648 - -
Tpr4g0226 682 SMART serkin_6 358 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g0226 682 CDD STKc_IRAK 364 630 - -
Tpr4g0226 682 CDD lectin_legume_LecRK_Arcelin_ConA 40 251 IPR001220 GO:0030246
Tpr4g0226 682 ProSitePatterns Legume lectins beta-chain signature. 132 138 IPR019825 -
Tpr4g0226 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0226 Tpr-Chr4 2331707 2334106 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0226 8 665 Receptor kinase-like Gene Family AT5G55830 55.378 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr4g0226 Pkinase 2.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0226 - - adu:107496163 884.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0226 4 2331707 2334106 Tpr4g0226 4 2331707 2334106 ECH
Tpr3g3864 3 43108472 43110951 Tpr4g0226 4 2331707 2334106 PCT