Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0224 ATGGTGGGATGTGCAGCTGAATTCATTAGAATTGTTACTAGTAAGGCCAACTATTACTGCCAATTGGAACAAAGAGACACAATTACTGCTGAAGATTTGATAGATGCTATGCGAAAAATGCGTCTCGATGTCATCGCTGATTATTCCTCCCGATACAACCAACACTATCATAACTTTCATGCTTCTGTGAGCGGTCAATACGCTCCCCCACCACCACCACCGTTGCCACAAGATGTTCAAGCTTGTGTTAGCGGCGAATATTATGCTCCACCACCACCACCACTGCTGCCACAAGATGTTCAAGCTCGTGTTAGCGGCCAATATTATGCTCCCCCTCCTCCACCACCACTGTCATTACAAGATGTTCAAGCTCGCAATTTTTCAATGGCTCCAAATTCCAAGTTTCCGAACCCAATAGAAATGAGTACATTTTTTGGAGTTGATGATGAAGTACTTCCATCACCATTGCTGCCACAAAATGTTCAAGCTGTTAGCGGCCAATATTATGCTCCTTCTATATCACCACTGCCATCACAGGATGTTCAAGCTCCCAATTTTTTTATGGCTCCAAATTTCAAGTTTCCGAACCCAATAGAAATGGGTACATTTTTTGGAGGTGATGATAGTGAAGAACTTCCTCCACCACTACTATCACAAGATGTTCAAACTTATGTTGGTGGCCAATGCGCACCTCCTCCACCACCACCACAGGATGACCAAGCTCGCTATTTTCCAATGGCTTCAAATTTCAAGTTTCCAAATCCAATAGAAATGGGTTCATTTTTTGGATATGATGATGGTGAAGAACTTCCTCCACCACCACCACCACAACAACTGCCACGAGATGTTCAAGCTCGTGTCAGGGGCCAATACGCACCTCCTCCACCTCCACTGGATGTTCAAGCTTGCTATTTTCCAAAGCCTCCAAATTTCAAGTTTCCGAACCCAATAGAAATTGGTGCATATTTTGGAGATGATGGTGGTGAAGAACTTCCTCCACCACCACCACAAGATGTTCAAGCTAGTGTCAGTGGCCAATATGCACCTCCTCCACCACCACTGCTACCACAGGATGTTCAAGCTCATGATTTTTCAATGGCTCCAAATTTCATGTTTCGGGAACCAACAGAGATGGGTTCACTATTTGGAGATGGTTATGGTGAGGAACTTGACGGTGGCGGTGGCGGTGGCGGTGGCGGTGGAGATGGTAATTCAGAAGGCTTTGATCTTATTGCTTTTCTTAATAGTTATGACAAGTGA 1260 0.4468 MVGCAAEFIRIVTSKANYYCQLEQRDTITAEDLIDAMRKMRLDVIADYSSRYNQHYHNFHASVSGQYAPPPPPPLPQDVQACVSGEYYAPPPPPLLPQDVQARVSGQYYAPPPPPPLSLQDVQARNFSMAPNSKFPNPIEMSTFFGVDDEVLPSPLLPQNVQAVSGQYYAPSISPLPSQDVQAPNFFMAPNFKFPNPIEMGTFFGGDDSEELPPPLLSQDVQTYVGGQCAPPPPPPQDDQARYFPMASNFKFPNPIEMGSFFGYDDGEELPPPPPPQQLPRDVQARVRGQYAPPPPPLDVQACYFPKPPNFKFPNPIEIGAYFGDDGGEELPPPPPQDVQASVSGQYAPPPPPLLPQDVQAHDFSMAPNFMFREPTEMGSLFGDGYGEELDGGGGGGGGGGDGNSEGFDLIAFLNSYDK* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0224 419 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 3 76 IPR027113 GO:0001228|GO:0006355|GO:0016602
Tpr4g0224 419 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 3 76 - -
Tpr4g0224 419 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 1 37 IPR003958 -
Tpr4g0224 419 MobiDBLite consensus disorder prediction 384 404 - -
Tpr4g0224 419 Gene3D Histone, subunit A 1 67 IPR009072 GO:0046982
Tpr4g0224 419 SUPERFAMILY Histone-fold 1 73 IPR009072 GO:0046982
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0224 4 77 CCAAT-HAP3 Transcription Factor Family AT1G21970 38.462 1.01e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0224 - K08065 soe:110801369 70.8626