Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0197 ATGTCCTCATTAATCCAACAACAGTTACCTTTCCAAATGGAGGATACTTTCCCCATCCTTTTGAGTCTTATCCTTTTGACAATGTTTTTGATCCTAAATGTGACAAAGAGATTCAAACCTAAAAGTAGTAGTGACAACATTACCTCAAACCTTCCACCAGGACCTTGGAAACTACCAATTTTTGGAAGCATACATCACCTCATTGGCTCCCTACCACACCACAAAATGAGAGAATTGTCCCAAAAATATGGTCCTCTCATGCACCTACAACTTGGAGAGACATCAGCCATAGTGGTTTCTTCTAAAGAACTTGCAAAAGAAGTGTTGAAAACAAATGAAGTCAAATTTGCTCAAAGACATTGCTCTCTTGGTATAGAAATTATTTCTTATGGTTGCACTGACATTGCATTTTCACCCTATGGAGACTATTGGAGGCAGCTAAGAAAAATATGCACATTGGAACTGTTGACTGCTAAACGCGTGAGATCGTTCCGATCGATTCGCGAGGAAGAGGTGTCAAAATTAATTAGACATATTTCTATAAACACAGGAACTACTATCAATCTCACAAATGAAATCTTATCTATGACATATAACATAATTTCAAGGGCATCTTTTGGTGATAAATGCAAGGACCAAGAATCATATATCTTGTTCATGAAGGAATGTATGAGATTGGCTGAAAATTTCAGCGTCAGTAATTTGTTTCCCTCCCAACACTGGCTACATGTGATTAGTGGTATGGTGCATAAATTGAAGAGATTGCATAGAAGTGGTGATATGGTTCTTGAAAAGATCATCAACAAAGCAACGACAAAGACTTGTGAAGATGGAAGTCTTCTGTCCTATCTTTTGAAGCTCAAAGACGACGGCTCTTCTAATCCGACTGGATTTCATTTGACAATCAACAACATTAAAGCCATTATTCAGGATATGCTTATCGGTGGAAGTGATTCATCATCTTTAACTATGGAATGGGCTTTCTCCGAATTGCTAAAAAATCCTAAAGCACTAAAAAGGGCTCAAGAAGAAGTTAGACAAGCTTTTGGTAGCAGAGGATATGTTGATGAAATGGATCTTCAAGAACTGAAATTTCTAAAAGCAGTTATTAAAGAAACCTTAAGATTGCACCCTATTAATCCTATATATTCAAGAGAGTGTATTGAAACGTGTGAGATAAATGGATACACAATACCAGCTGGAACACAAGTGTTTGTGAATGCATGGGCAATCGGACGAGACCAAAAGTACTGGAATGAAGGAGAAAAGTTTTATCCGGAAAGGTTCTTGGATTGTCCAATTGATTACAAAGGGTCCGATTTTGAGTTCTTGCCTTTTGGTGCTGGAAGGAGAATGTGTCCTGGGATCTCTTTTGCTATGCCTAATATAGAACTTGCTCTTGCACAATTGCTGTACTATTTTGATTGGGAGTTTCCCTTTGGAACCAGTCATGAAAGTTTTGACATGTCCGAAGCCTTTGGCGCTGTAGTGAAAAGGAAAAGTGAGCTAACAGTAATTCCAACTCCTTACAATCCTTGA 1539 0.3808 MSSLIQQQLPFQMEDTFPILLSLILLTMFLILNVTKRFKPKSSSDNITSNLPPGPWKLPIFGSIHHLIGSLPHHKMRELSQKYGPLMHLQLGETSAIVVSSKELAKEVLKTNEVKFAQRHCSLGIEIISYGCTDIAFSPYGDYWRQLRKICTLELLTAKRVRSFRSIREEEVSKLIRHISINTGTTINLTNEILSMTYNIISRASFGDKCKDQESYILFMKECMRLAENFSVSNLFPSQHWLHVISGMVHKLKRLHRSGDMVLEKIINKATTKTCEDGSLLSYLLKLKDDGSSNPTGFHLTINNIKAIIQDMLIGGSDSSSLTMEWAFSELLKNPKALKRAQEEVRQAFGSRGYVDEMDLQELKFLKAVIKETLRLHPINPIYSRECIETCEINGYTIPAGTQVFVNAWAIGRDQKYWNEGEKFYPERFLDCPIDYKGSDFEFLPFGAGRRMCPGISFAMPNIELALAQLLYYFDWEFPFGTSHESFDMSEAFGAVVKRKSELTVIPTPYNP* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0197 512 Pfam Cytochrome P450 52 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0197 512 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0197 512 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0197 512 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0197 512 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0197 512 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0197 512 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0197 512 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0197 512 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0197 512 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0197 512 PANTHER CYTOCHROME P450 71B11-RELATED 25 510 - -
Tpr4g0197 512 PANTHER CYTOCHROME P450 FAMILY PROTEIN 25 510 - -
Tpr4g0197 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Tpr4g0197 512 Gene3D Cytochrome P450 45 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0197 512 SUPERFAMILY Cytochrome P450 52 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0197 512 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0197 512 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0197 512 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0197 512 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0197 Tpr-Chr4 2083933 2085596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0197 49 499 Cytochrome P450 AT3G48310 41.060 3.10e-122 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0197 - K23807 gmx:100779851 556.599