Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0189 ATGGAAGAAGCACAAGTTGAGGTAAGAAGAGTGTTTGATGGAAAGGGAGAAAATAGGGAGAGATGTCAAATCAATGGATATGAGATCCCAGCAAAGACTAGAATTGTTGTCAATGCTTGGGCAATTGGAAGAAATCCGAGGTATCGGATCGAAGCGGATAGTTTTAAACCTGAGAGGTTTGTTAATAGCCTAATTGATTTCAAAGGCACAGACTTTGAATACATACCATTTGGTGCTGGAAGGAGGATGTGTCCTGGCATTGCATTTGCCATACCCAACGTTGAGCTGCCTCTTGCTCAGTTACTTTACAATTTTGATTGGAAGCTTCCCAATGGAATGAAGAATGAAGAACTCAATATGACCGAGTCATTTGGGATTACTGCAGGAAGAAAATATGATCTATGTTTGATTCCTATAACTCGTCGTACTTAA 432 0.4005 MEEAQVEVRRVFDGKGENRERCQINGYEIPAKTRIVVNAWAIGRNPRYRIEADSFKPERFVNSLIDFKGTDFEYIPFGAGRRMCPGIAFAIPNVELPLAQLLYNFDWKLPNGMKNEELNMTESFGITAGRKYDLCLIPITRRT* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0189 143 PANTHER CYTOCHROME P450 71B11-RELATED 17 141 - -
Tpr4g0189 143 Gene3D Cytochrome P450 16 132 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0189 143 PRINTS E-class P450 group I signature 38 62 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0189 143 PRINTS E-class P450 group I signature 74 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0189 143 PRINTS E-class P450 group I signature 84 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0189 143 PANTHER CYTOCHROME P450 71D10 17 141 - -
Tpr4g0189 143 Pfam Cytochrome P450 21 127 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0189 143 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 77 86 IPR017972 GO:0005506|GO:0016705
Tpr4g0189 143 SUPERFAMILY Cytochrome P450 19 141 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0189 Tpr-Chr4 2029986 2030523 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0189 23 138 Cytochrome P450 AT3G26330 56.034 7.51e-42 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0189 - - gmx:606548 225.328