Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0163 ATGGCTACATTTTCATCTCTTTACCCTTACAATCCTATGCTTTTCGTTCCAACTTCTTCCTCAAATTATCATTTTGCTTCTTCGTTTTTGCGACGAACCAAATTCATTGTTCTTTCCTCTCATTCCAATCCCAAAATTCTTAAAACCAACAGAAAATCAATTTATGGAAAAACCCTCTCGCCGTACGATTCCGATGAAGAAAATGATGAAATGGACGACGAAGATGATGATGAAGATGAAGATGATGATGATGATGATGAAGATTGGTTCTCTGATGATGAGGAATTTGCTGAGCCTGCTGATCTTGATCCTAAAGTCAAGAGATTGAAGTCAAAGACACTTGCAGGTAGACAACAGGAAAAGGAAAACGGTGTGAGATCTCTTTACAATGGACAAAGCAATAGGTTGCCCAAAAGTCGGAGAATAGCATCGTTACAAGAAAATAACAGTGCAAAGTTTGGTAGAAATTATAAGGAGAAAAGATATCCGGAGTTGTCTGATGTGATTGCTTTGGATGTGAATTGGTTACCACTTCTTGATTACTTAAGCACCTTTGGAATTAAGGAATCACAATTTGTCCAAATTTACGAGAGGCACATGGCATCGTTTCAAATTAATGTATATTCTGCACAAGAAAGGGTTGAATACTTATTGAGTCTTGGGGTTAAACATACAAATATAAGAAGGATCCTTTTGAGGCAACCACAAATTCTCGAATATACGGTGGAGAACAATTTGAAGACACACGTCGCTTTCTTGATGGGTTTGGGCGTACCTAGTTCCAAATTGGGGCAAATTATTGCTTCTACTCCTTCCATTTTTTCTTATAGTGTTGAGAACTCGTTAAAACCAACAGTGAGATATTTAATTGAAGAAGTCGGCATCAAGGAAAAAGATTTGGGTAAAGTCATTCAACTGAGTCCTCAAATTCTTGTCCAACGTATTGACATTTCATGGAATGCTCGATTTATGTTCCTTACCAAAGAGTTGGGTGCACCAAAAGAGAGCATTGTGAAGATGGTGACGAAACACCCTCAGCTTCTCCATTACAGTATTGATGATGGATTGCTGCCAAGAATAAATTTCTTACGGAGCATAGGAATGAAAAATGCAGATATCTTGAAAATCTTAACTAGCCTTACACAGGTGCTATCTCTGTCCTTGGAGGCTAATCTAAAGCCGAAGTATTTGTACTTGGTAAATGAACTTCGCAATGAGGTGAAATCCTTGACTAAATACCCGATGTACCTTAGCTTGTCTTTGGACCAGAGAATACGCCCTCGTCATACGTTCTTGGTTTCCCTGAAGAAAGCTCCAAAAGGACCATTTCCTCTTGGATCTCTAGTCCCAACTGATGAAGCCTTTTGTCAACAGTGGGCTGGTACTACTCTTGATAAATATTTGGCATTTCGCAATAGATTATTACTCAAAAAGTTTGCAGATAAATATGACAAAAATGTGAAAAGATAA 1470 0.381 MATFSSLYPYNPMLFVPTSSSNYHFASSFLRRTKFIVLSSHSNPKILKTNRKSIYGKTLSPYDSDEENDEMDDEDDDEDEDDDDDDEDWFSDDEEFAEPADLDPKVKRLKSKTLAGRQQEKENGVRSLYNGQSNRLPKSRRIASLQENNSAKFGRNYKEKRYPELSDVIALDVNWLPLLDYLSTFGIKESQFVQIYERHMASFQINVYSAQERVEYLLSLGVKHTNIRRILLRQPQILEYTVENNLKTHVAFLMGLGVPSSKLGQIIASTPSIFSYSVENSLKPTVRYLIEEVGIKEKDLGKVIQLSPQILVQRIDISWNARFMFLTKELGAPKESIVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMKNADILKILTSLTQVLSLSLEANLKPKYLYLVNELRNEVKSLTKYPMYLSLSLDQRIRPRHTFLVSLKKAPKGPFPLGSLVPTDEAFCQQWAGTTLDKYLAFRNRLLLKKFADKYDKNVKR* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0163 489 Gene3D Transcription termination factor 3, mitochondrial 239 474 IPR038538 -
Tpr4g0163 489 MobiDBLite consensus disorder prediction 65 88 - -
Tpr4g0163 489 MobiDBLite consensus disorder prediction 111 134 - -
Tpr4g0163 489 PANTHER CGI-12 PROTEIN-RELATED 26 479 IPR003690 GO:0003690|GO:0006355
Tpr4g0163 489 MobiDBLite consensus disorder prediction 120 134 - -
Tpr4g0163 489 MobiDBLite consensus disorder prediction 57 88 - -
Tpr4g0163 489 Pfam mTERF 241 435 IPR003690 GO:0003690|GO:0006355
Tpr4g0163 489 Pfam mTERF 180 253 IPR003690 GO:0003690|GO:0006355
Tpr4g0163 489 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF9, CHLOROPLASTIC 26 479 - -
Tpr4g0163 489 SMART mt_12 193 223 IPR003690 GO:0003690|GO:0006355
Tpr4g0163 489 SMART mt_12 228 259 IPR003690 GO:0003690|GO:0006355
Tpr4g0163 489 SMART mt_12 407 438 IPR003690 GO:0003690|GO:0006355
Tpr4g0163 489 SMART mt_12 301 333 IPR003690 GO:0003690|GO:0006355
Tpr4g0163 489 SMART mt_12 264 296 IPR003690 GO:0003690|GO:0006355
Tpr4g0163 489 SMART mt_12 374 406 IPR003690 GO:0003690|GO:0006355
Tpr4g0163 489 SMART mt_12 338 369 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tpr4g0163 mTERF 7.3e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0163 K15032 - gmx:102660933 669.463