Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0161 ATGGAAATTCACAATAATTTTTCTTTTATTATTACCTTCATTTCCTCCTTTCTCTTCCTTTTGGTGCTATTCAAAATAGTTACAAGATGGAGTGATATCAATTTACCACCAGGACCATGGAAATTGCCCTTCATAGGAAACATACACCAGATTATCAGCAGCTCACTGCCTCATCGCCGCTTCCAAAATCTGGCCAAGAAATATGGACCTTTAATGCACCTAAAATTAGGAGAGGTATCATACTTAATAGTTAGTTCACCAGAAATGGCGAAAGAGATTATGAAAACACATGATATCAACTTTTGTGATAGGCCAAACCTTCTTTTGTCAACACTATGGAGTTACAATGCTACGGATATAGTCTTCGGTACATACGGAGAACACTGGAGACAACTCAAAAAGATATGCGTTGTTGAGCTATTAAGTGAAAAACGCGTTCAATCATTTAGGTCCATAAGAAAAGAAGAGGTGTCGAATCTTGTTAAATCAATATTTGAAAGTGAAGGTTCTGTTGTTAATTTCACTCAAAAGATTATCTCATTGACAAATGGGATTACAGCGCGTGCAGCTTTTGGAAAAAGGAATAGACATGAAAAAGTGTTCATATCAGCAATGGAGGAAATATTAAGACTATTTGGAGGATTTTGTATTGCAGATTTGTATCCGTCTATTAAAATGCTTCAAATGTTGAGTTTGTCGAAGAACCAACTTGTAAAACTTCAAAGAGAGTTTGATATCATAATGCAAGACATTATTGATGACCACAAATGCAGTCACAAGGAAGCAGGCAAGGAAGATGATCTAGTAGATGTTCTTCTCGAGATTCAACGAGAAAATGATCGCTCACAACATGTCTTGACCGATGAAAATATAAAATCAATCATCCAGGACATGTTCGCTGCTGGTACAGAACCATCGTCACAGGTTGTGCTATGGGGGATGTCTGAGATGGTAAAGAATCCAAAGGTAATGGAAGAAGCACAAGCCGAGGTAAGACGAGTGTTTGATAAAAAGGGGCATGTAGATGAGACAGAGATGCACCAATTGATATACTTAAAGAATGTCGTCAAAGAAACACTGAGGTTGCATCCTACTGCGCCGTTGTTAGTTCCAAGAGAAAGTAGGGAGACATGCCAAATCAATGGTTATGTTATCCCAGCTAAGACAAGGGTCTTGGTCAATGCTTGGGCTATTGGAAGAGATCCAAGGTATTGGGATGATGCTGAGAGTTTTAAACCCGAGAGGTTTTTTAATAGTCCGATTGATTTTAAAGGCACGGACTTTGAATACATACCATTTGGTGCGGGAAGGAGGATGTGTCCAGGCATTGCATTTGGCTTGCCTAACGTTGATCTGCCTCTTGCTCAGTTACTTTACTACTTCGATTGGAAGCTTCCCAATAAAATGAAGAATGAAGAATTAGATATGACGGAGCTATTTGGACTTGGTGTAGGAAGAAAACATGACCTATGCTTAATTCCTATTACTCGTCGTCCTTAA 1500 0.3867 MEIHNNFSFIITFISSFLFLLVLFKIVTRWSDINLPPGPWKLPFIGNIHQIISSSLPHRRFQNLAKKYGPLMHLKLGEVSYLIVSSPEMAKEIMKTHDINFCDRPNLLLSTLWSYNATDIVFGTYGEHWRQLKKICVVELLSEKRVQSFRSIRKEEVSNLVKSIFESEGSVVNFTQKIISLTNGITARAAFGKRNRHEKVFISAMEEILRLFGGFCIADLYPSIKMLQMLSLSKNQLVKLQREFDIIMQDIIDDHKCSHKEAGKEDDLVDVLLEIQRENDRSQHVLTDENIKSIIQDMFAAGTEPSSQVVLWGMSEMVKNPKVMEEAQAEVRRVFDKKGHVDETEMHQLIYLKNVVKETLRLHPTAPLLVPRESRETCQINGYVIPAKTRVLVNAWAIGRDPRYWDDAESFKPERFFNSPIDFKGTDFEYIPFGAGRRMCPGIAFGLPNVDLPLAQLLYYFDWKLPNKMKNEELDMTELFGLGVGRKHDLCLIPITRRP* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0161 499 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0161 499 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0161 499 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0161 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Tpr4g0161 499 PANTHER CYTOCHROME P450 71B11-RELATED 12 497 - -
Tpr4g0161 499 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0161 499 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0161 499 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0161 499 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0161 499 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0161 499 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0161 499 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0161 499 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0161 499 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0161 499 PANTHER CYTOCHROME P450 71D10 12 497 - -
Tpr4g0161 499 Gene3D Cytochrome P450 29 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0161 499 Pfam Cytochrome P450 36 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0161 499 SUPERFAMILY Cytochrome P450 34 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0161 Tpr-Chr4 1770684 1772662 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0161 18 497 Cytochrome P450 AT3G26280 41.296 2.12e-128 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0161 - K23806 gmx:606548 632.098