Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0160 ATGGTGCTTCACAACCCTTTTTCCAATATCACCTTAATGGCCTCCTTTCTCTTCATCTTGGTGTTATTCAGAATAGTTAAAAGATGGAGGTGTAACAATTCCACCATCAATTTACCACCAGGACCATGGACACTACCCTTCATAGGAAACATACATCAGGTAATCAGTAGCTCATTGCCTCATCACTGCTTCAAAGATTTGGCAGATAAATATGGACCCTTAATGCACCTAAAACTAGGAGAGGTATCATACATAATAGTTAGTTCACCAGAAATGGCCAAAGAGATTATGAAAACAAATGACCTTACCTTTTGTGATAGGCCAAACCTTTTTTTGTCCACAATACTTAGTTACAATGCTACTGATATTGCCTTCTCTACATACGGAGAATATTGGAGGCAACTACGAAAGTTATGTGTTATAGAGCTATTAAGTGTGAAGCGTGTTCAATCATTTAGGTATGTAAGAGAAGAAGAAGTTTTGAATCTTGTTAAATCAATATCTGCAAGTGAAGGATCAGTTGTTAATCTCACTCAAAAGATTTTTTCAACGACATATGGGATAACAGCGCGGACAGCTTTTGGTAAAAGGAATATACATCAAGAAGCGTTCAAATTAGCAATGGAGGAAGCTTTGAGCCTGTTGGGAGGAGTTTGTATTGTTGATTTGTATCCTTCTATTAAAATACTTCGAAGGGTGAGTAGGGCGAAGACCAAACTTGAAAAGGCTCAAAGAGCTCTGGATATGATATTGCAAGACATCATCGATGATCATAAAAGAAGTCGTAGAGAAGAAAGCAAGGATGAAGATCTAGTTGATGTTCTTCTTAATATTCAACAAGAAAATTATCACTCACAGCATCCCTTGACCGATGATAATTTGAAAGCAGTCATCCAGGACTTGTTCACTGGTGGTGGCGAAACATCGCCAGGGGCTGTATTATGGGGAATGTCTGAGATGGTAAAAAACCCAAAAGTGATGGAAGAAGCACATGCTGAGGTAAGAAGAGTTTTTGATGGAAAGGGTTTTGTGGACGAGACAGAATTACACCAATTGATATACTTAAAGTCTGTCATCAAAGAAACTATGAGGCTACATCCTACCCTACCACTGTTAGTTCCAAGAGAAAGTAGAGAGAGATGCCAAATCAATGGATATGAGATCCCAGCAAAGACTAGGGTCATGGTTAACGCTTGGGCTATTGGAAGAGATCCAAAGTATTGGGTTGAAGCTGAGAGTTTTAAACCTGAAAGGTTTGTAAATAGCCCTATTGATTTCAAAGGCACAAACTTTGAATATATACCATTTGGTGCGGGAAGGAGGATCTGTCCTGGCATTGAATTTGCCATATCCATCGTTGAACTACCTCTTGCTCAGTTACTTTACCACTTTGATTGGAAACTTCCCAATGGAATGAAGAATGAAGAACTTGATATGACTGAGTCATTTGGGATTACTGTAGGAAGAAAACAGGATCTATGTTTGATTCCAATTACTCGTCGTACTTAA 1509 0.3863 MVLHNPFSNITLMASFLFILVLFRIVKRWRCNNSTINLPPGPWTLPFIGNIHQVISSSLPHHCFKDLADKYGPLMHLKLGEVSYIIVSSPEMAKEIMKTNDLTFCDRPNLFLSTILSYNATDIAFSTYGEYWRQLRKLCVIELLSVKRVQSFRYVREEEVLNLVKSISASEGSVVNLTQKIFSTTYGITARTAFGKRNIHQEAFKLAMEEALSLLGGVCIVDLYPSIKILRRVSRAKTKLEKAQRALDMILQDIIDDHKRSRREESKDEDLVDVLLNIQQENYHSQHPLTDDNLKAVIQDLFTGGGETSPGAVLWGMSEMVKNPKVMEEAHAEVRRVFDGKGFVDETELHQLIYLKSVIKETMRLHPTLPLLVPRESRERCQINGYEIPAKTRVMVNAWAIGRDPKYWVEAESFKPERFVNSPIDFKGTNFEYIPFGAGRRICPGIEFAISIVELPLAQLLYHFDWKLPNGMKNEELDMTESFGITVGRKQDLCLIPITRRT* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0160 502 Gene3D Cytochrome P450 31 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0160 502 SUPERFAMILY Cytochrome P450 39 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0160 502 Pfam Cytochrome P450 39 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0160 502 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0160 502 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0160 502 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0160 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Tpr4g0160 502 Coils Coil 233 253 - -
Tpr4g0160 502 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0160 502 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0160 502 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0160 502 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0160 502 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0160 502 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0160 502 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0160 502 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0160 502 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0160 502 PANTHER CYTOCHROME P450 71B11-RELATED 11 500 - -
Tpr4g0160 502 PANTHER CYTOCHROME P450 71D10 11 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0160 Tpr-Chr4 1762911 1765983 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0160 10 498 Cytochrome P450 AT1G13110 41.107 2.29e-136 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0160 - K23806 gmx:606548 656.751