Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0159 ATGGTCTTCTTTATGTTCTTCTTGGTGCTACTCAAAATAGTTAAAAAATGGAGTAATAAAAATTCCAATGTCAATTTACCACCAGGACCATGGACATTGCCCCTCATAGGTAACATGCATCAGATTATTATGAGCAGCCCATTGCCCCATCACTGCTTCAAAAAATTGGCAGAGAAATATGGATCATTAATGCACCTAAAATTAGGAGAAGTAACATACATAATAGTCAGTTCACCAGAAATGGCCAAAGAGATTATGAAAACACATGACCTAACCTTTTGTGATAGGCCAAACCTTCTTTTGTCCACAATATGGAGTTACAACAATACTGATATTATATTCTCTCCATATGGAGAATATTGGAGGCAATTACGAAAGATATGCGTTATAGAGCTGTTAAGTGAAAAACGTGTCCAATCATTTAGGTCCATAAGAGAAGAAGAGGGTTCAATACTAGTTAAATCAATTTCTTCAAGTGAAGGATCAATTGTTAATCTCAATCATAAGATTTCCTCAATGATAAGTGGGATAACAACGCGAGCAGCTTTTGGGAAAAAGAGCATACATCAACAAGTGTTTAAATCAAAAATGAGTGAAGTAATAGCCCTATCGGGAGGATTTTGTATTGTTGATTTGTATCCTTCTATTAAAATGCTTCAAAGGGTGAGTTCGGCGAAGACTAAAATGGAAAAAATTCAAAGAGAGCTTGATATGATATTGCAAGACATCATCAATGATCACAAAAGTAATCATAGAGAAGAAAGCAAGGATGAAGATCTAGTTGATGTTCTTCTCAAAATTCAACAAGAAAATGATCCCTCACAACATCCCTTGACTGATGATGGTATTAAATCAGTCATTCTGGACATATATGCTGCTGGTACTGAAACATCGTCAGAGGTTATATTATGGGCGATGTCTGAGATGGTAAAGAACCCAAAAGTAATGGAAGTAGCACAATCTGAGGTAAGAAGAGTGTTTGATAAAAAGGGGTATGTGGATGAGACAGAGTTGCACCAATTGATATACTTAAAGTCTGTCATCAAAGAGACGCTGAGATTGCATCCTGTTGTACCATTGTTGCTTCCGAGAGAATGTAGGGAGCGATGCCAAATCAATGGGTACGATATTCCGGTCAAGACAAGGGTTGCTGTCAATGTTTGGGCGATTGGACGAGATCAAAGGTATTGGGTTGAAGCTGAGAGTTTTAAACCCGAGAGATTTGTTAACAGCGAATTTAATTTTAAAGGTACAAACTTTGAATACATACCATTTGGTGCTGGAAGGAGGATATGTCCTGGCATTACATTTGGCTTACCCAACGTTGAATTGCCTCTTGCTCAGTTACTTTACCACTTTGATTGGAAGCTTCCCAATAAAATGAAGAATGAAGAACTAGATATGACAGAGTCATTTGGGGCTACATTACGAAGAAAACATGACCTATGCTTGATTCCTTTTACTCGTCATCTTTGA 1476 0.3726 MVFFMFFLVLLKIVKKWSNKNSNVNLPPGPWTLPLIGNMHQIIMSSPLPHHCFKKLAEKYGSLMHLKLGEVTYIIVSSPEMAKEIMKTHDLTFCDRPNLLLSTIWSYNNTDIIFSPYGEYWRQLRKICVIELLSEKRVQSFRSIREEEGSILVKSISSSEGSIVNLNHKISSMISGITTRAAFGKKSIHQQVFKSKMSEVIALSGGFCIVDLYPSIKMLQRVSSAKTKMEKIQRELDMILQDIINDHKSNHREESKDEDLVDVLLKIQQENDPSQHPLTDDGIKSVILDIYAAGTETSSEVILWAMSEMVKNPKVMEVAQSEVRRVFDKKGYVDETELHQLIYLKSVIKETLRLHPVVPLLLPRECRERCQINGYDIPVKTRVAVNVWAIGRDQRYWVEAESFKPERFVNSEFNFKGTNFEYIPFGAGRRICPGITFGLPNVELPLAQLLYHFDWKLPNKMKNEELDMTESFGATLRRKHDLCLIPFTRHL* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0159 491 PANTHER CYTOCHROME P450 71B11-RELATED 3 489 - -
Tpr4g0159 491 Coils Coil 222 242 - -
Tpr4g0159 491 Gene3D Cytochrome P450 19 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0159 491 PANTHER CYTOCHROME P450 71D10 3 489 - -
Tpr4g0159 491 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506|GO:0016705
Tpr4g0159 491 SUPERFAMILY Cytochrome P450 27 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0159 491 PRINTS P450 superfamily signature 293 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0159 491 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0159 491 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0159 491 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0159 491 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0159 491 PRINTS E-class P450 group I signature 282 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0159 491 PRINTS E-class P450 group I signature 302 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0159 491 PRINTS E-class P450 group I signature 345 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0159 491 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0159 491 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0159 491 PRINTS E-class P450 group I signature 432 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0159 491 Pfam Cytochrome P450 27 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0159 Tpr-Chr4 1759251 1769155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0159 7 490 Cytochrome P450 AT1G13110 41.331 1.70e-136 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0159 - K23806 gmx:606548 619.002