Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0154 ATGATGCCAAGTGTTAACCCGGATTCGTCTGACAAAGATTCGGAGGCATTCGAGGAAACCGATCCAACTGGTCGATATGGTAGATACAGCGAACTATTAGGATGCGGTGCCGTGAAGAAAGTGTACCGTGCATTCGATCAAGAAGAAGGAATAGAGGTAGCATGGAACCAAGTGAAGCTAAGGAATTTCTGTGGTGACTCTGCTATGGTAGAGAGGCTTTATGCTGAAGTGAGGTTATTGAGAAGCTTATCAAACAAAAACATCATTGAACTTTATAGTGTTTGGAGCGATGATAAAAAGAATACACTCAATTTTATCACCGAGGTTTGTACTAGTGGGAATTTGAGAGAGTATAGGAAGAAACATAGGCATGTTTCGATGAAGGCGTTGAAGAAATGGTCTAGGCAGATTTTGAGAGGGTTGAATTATTTGCACACTCATGAGCCGTGCATCATTCATAGAGATCTCAATTGCAGCAACGTGTTTGTTAATGGGAATGTTGGCAAGGTTAAAATCGGTGACTTGGGTTTGGCAGCAATTGTTGGGAAGAATCATATTGCACACACAATTCTTGGTACACCGGAGTTTATGGCACCGGAATTATACGATGAAGACTACACAGAATTGGTGGACATATACTCATTTGGAATGTGTGTTTTAGAGATGGTTACATTGGAAATTCCTTATAGCGAATGCGACAATGTTGCAAAGATATACAGGAAAGTGTCTTCCGGTATAAGGCCTGCTGCATTGAACAAGGTCAAAGATTCAGAGGTAAAGGACTTCATTGAGAGGTGTCTTGCTCAACCAAGGGCTAGACCTTCTGCTGCTGAGCTTCTCCAAGATCCTTTCTTTGATGAACTTGTCGGTGAAGAGGATGATGATGACGAAAATGGTGACTATGTTTGTTCATACTAA 918 0.415 MMPSVNPDSSDKDSEAFEETDPTGRYGRYSELLGCGAVKKVYRAFDQEEGIEVAWNQVKLRNFCGDSAMVERLYAEVRLLRSLSNKNIIELYSVWSDDKKNTLNFITEVCTSGNLREYRKKHRHVSMKALKKWSRQILRGLNYLHTHEPCIIHRDLNCSNVFVNGNVGKVKIGDLGLAAIVGKNHIAHTILGTPEFMAPELYDEDYTELVDIYSFGMCVLEMVTLEIPYSECDNVAKIYRKVSSGIRPAALNKVKDSEVKDFIERCLAQPRARPSAAELLQDPFFDELVGEEDDDDENGDYVCSY* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0154 305 Gene3D Phosphorylase Kinase; domain 1 10 108 - -
Tpr4g0154 305 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 305 - -
Tpr4g0154 305 Gene3D Transferase(Phosphotransferase) domain 1 110 290 - -
Tpr4g0154 305 CDD STKc_WNK 25 285 - -
Tpr4g0154 305 MobiDBLite consensus disorder prediction 1 23 - -
Tpr4g0154 305 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g0154 305 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g0154 305 PANTHER SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN 2 305 - -
Tpr4g0154 305 SUPERFAMILY Protein kinase-like (PK-like) 21 289 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0154 Tpr-Chr4 1715088 1717353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0154 6 289 MAP Kinase Kinase Kinase AT5G55560 79.225 2.67e-177 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Tpr4g0154 Pkinase 1.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0154 K08867 - gmx:100816060 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0154 4 1715088 1717353 Tpr4g0154 4 1715088 1717353 ECH
Tpr3g4048 3 45061892 45064132 Tpr4g0154 4 1715088 1717353 PCT