Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0139 ATGGGTTTCCGTTTAAATGTTATTCGACAGGCATCATTAACTGCCAACCAAACAACATCAAAATCTGCAGAAGCGAGAAAGGGCTATGTTGCAGTGTATGTTGGAGAGAAACAGAAGCGGTTTCTGATCCCAATATCATACTTGAACCAACCATTGTTTCAAGAGTTGTTGAGTCAAGCTGAGGACGAGTTTGGATATGATCATCCCATGGGTGGCCTCACCATTCCTTGTCCTGAAGATGTCTTTCAACACATAACTTCTCACTTCAAAGGGCTATGA 279 0.4229 MGFRLNVIRQASLTANQTTSKSAEARKGYVAVYVGEKQKRFLIPISYLNQPLFQELLSQAEDEFGYDHPMGGLTIPCPEDVFQHITSHFKGL* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0139 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Tpr4g0139 92 Pfam Auxin responsive protein 12 87 IPR003676 GO:0009733
Tpr4g0139 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0139 Tpr-Chr4 1603191 1603571 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0139 14 85 Calmodulin-binding Proteins AT3G43120 44.444 2.35e-17 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0139 K14488 - gmx:100816803 148.673