Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0138 ATGGATATTAACAGTCACTGCAAAGGAACATTTGAATCTGTTGGCTCCACAGAGTTGCAGAATGCTGGCAAAGCTGGTTTGGTGCAAAATCAAGGAAAAATTTCGGCTGTTTTAGGAACCAGGATGATGGAAGGAAGAGATGGTTGGGCTTTGAAAGCACCTCTTGATATCAAGTTTTTGAAGGGTTTAGAGAACAAGTCAAAACTGAAGAAGGCAATTGGTTTGAAAGATATTGAGGGCAAATTGAAATCTATTAACGGCCACACATTTGATGATTTGGAGATACAAATTAGCAAGCCTCGTGTCAAGAGCATTCGTACTGAGTCCGGGTATCTAGTCGATTGTGTTGATATTAACAAACAACCAGCTTTTGATCATCCATTACTTAAAAATCATACATTACAGAGAAAACCAAGTTTTGAAAGAAATATGAATGAAACAAGTGTGAAGAGTTCGCCAAACAAACTCATATATTGGCTTGAGAATATTAGGTGTCCAAAAGGAACCGTTCCTATTCGAAGGATAACCAAAGTTGATCTTATTCGAGGAAAATCTGTATTCAATGATCATAACCTAATTCAATCCATTATGCATGAAGCTTATACGTACCATGAACCTCCTCCGGATGATATTATCCATGGAATTAAGGGAACTACTAGTATTTATAATCCAAAAGTTGATAAGGATCAATCAAGTTCAGGTCATTTATTCGTTCAAGATGCATTTCAAAAATTAATCATAAATGGTACTAATAAAATCATGGTTGGATGGCATGTATCTCCAAAATTATACAATGATGATCATTCAACTTATTTTTACTCGGCATGGACTTCAGATAATTTCAAAAGTACTGGATGCTACAATATGTTGTGCAAGGGTTTCGTTCAAATAGATAGGTCATATTACCTTGGTTCACGTATACGCAAAACATCTACCTATGGCGGAGAGATGATTGAAATGTCAATTTCTCTTAATAAGGATCGAACAACCCACAATTGGTGGTTAACAGTGGCAGATAAGACTATTGGATATTTTCCGGCAGCTTTATTCCCCAACATGGTCGAACCTTCCGGAGTGGGATGGGGTGGGTCAACATTATCTCCTATGGGTACTTCTAGTCCTTCAATGGGATCTGGACACTTACCTGATAAAGATTACGTTCATGCAAGTTATTTTAGAGATATTGGAATTCAAGTTGATGATTCTGGAATCTATAATCAACCAAGTGGAGACAAATACGTTGATGCTGATGCTGCCTCCTGTTATAATGTTGAATACTATGGAGATCAAGGAGAAGAATTTGGATATTCTCTTCAATTTGGAGGACCTGGTTGTAACTAG 1341 0.3706 MDINSHCKGTFESVGSTELQNAGKAGLVQNQGKISAVLGTRMMEGRDGWALKAPLDIKFLKGLENKSKLKKAIGLKDIEGKLKSINGHTFDDLEIQISKPRVKSIRTESGYLVDCVDINKQPAFDHPLLKNHTLQRKPSFERNMNETSVKSSPNKLIYWLENIRCPKGTVPIRRITKVDLIRGKSVFNDHNLIQSIMHEAYTYHEPPPDDIIHGIKGTTSIYNPKVDKDQSSSGHLFVQDAFQKLIINGTNKIMVGWHVSPKLYNDDHSTYFYSAWTSDNFKSTGCYNMLCKGFVQIDRSYYLGSRIRKTSTYGGEMIEMSISLNKDRTTHNWWLTVADKTIGYFPAALFPNMVEPSGVGWGGSTLSPMGTSSPSMGSGHLPDKDYVHASYFRDIGIQVDDSGIYNQPSGDKYVDADAASCYNVEYYGDQGEEFGYSLQFGGPGCN* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0138 446 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED 80 444 - -
Tpr4g0138 446 Pfam Neprosin 229 443 IPR004314 -
Tpr4g0138 446 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 80 444 - -
Tpr4g0138 446 Pfam Neprosin activation peptide 104 187 IPR025521 -
Tpr4g0138 446 Gene3D - 218 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0138 Tpr-Chr4 1592367 1600675 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0138 9 43 Sulfurtransferasese or Rhodanese AT2G42220 82.857 1.06e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0138 - - cam:101510422 384.415