Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0118 ATGAAGAGAAGATTCGCTTCATTAGGTGATGAACCTGAATCAGAAACTGAATATCAGTCACTGATTGTATCGAATTATCATCTTGAAGATAACGATGATGAACCAGTATCTTTTTCTGTTTTACCGATTCAATGGAGTGATTCTGAAGTTTTTAATTCTAATGATAAAAAAAAGGGACAGTTGCAGATTTTTTTGCATGGATCTGCTGATAATGGATTGCAGAAGATTTTCATGCAGGTTATTGCTTGGAAGTTTGATCTTTCTGGTTTGAAACCTGAGGTATCGTTGTTGTCGAAGGATAAGAGATGGATTAAGCTTCTGAAACCGAGGAAAAGTTTTCAGGATACTATTAAGACTGTTTTGATTACTCTTTATTTTCTTCATTGTGTTAAGAAAAAACACAGATTATCTGTTCATTCTTTTTGGAGTAACTTGTGTAAAGATAGGGATTTGAGCTCTTATGGGTTTAAGCCTTCACAAAAGGATTTATTGGATCATATGACTTTGATTGGTGAAGTTACCAAAAGAGATGCTGTCTTAGCTCGGTCTAAGCTTTTGCTCACAGTTTTAGGGGAGAAGCCAGAAGATCTGAAACCATCTGATGAGGAATTTGAAGATGATGATAGGGATAATGATATCATAGAAAAAGCTGACGAAGACTCAAAAGTAGAGGATGATTTGTTTGATTCTGTTTGTGCATTTTGTGACAATGGTGGCGATCTTATTATGTGTGATGGAGCATGCATGAGGTCATTTCATGCTACTAAGGCAGATGGTAGGGAATCTTTATGTGATTCCCTTGGTTTTACCAAGAAGGAAGTTTATGATATTGAGACGTTCCATTGTAAGAATTGTGAATACTGTCAGCATCAATGCTTTGCATGTGGTGAGCTGGGTTCTTCTGATAAAGATAAGGGTGCTGAGGTCATTAAATGTGCTTCTGAATGCTGTGACCGTTTCTATCATCCACGCTGTATTGCAAAGTTACTTCCCTCGGTAGTTAAGTATGTTGCCGAGGATCTTGAGAAAAATATTACTGATGGGAAGCCCTTTCTTTGTCCCATTCATTTTTGCTGTGTCTGTAAAGGATTGGAAAATAAGATGGAACCTGATTTGCAATTGGCAGTTTGTAACCGTTGTCCAAAGTCATACCATCGCAAATGTTTGCCAATTGGGATCGCTTTTGATGGTGATGGTGTTGAAACAAGGGCTTGGGAAGGTCTTTTGCCAAACAATCGCATTCTTATATATTGCTTAAATCATAAGATCATTGATAAGCTTGGGACTCCTGTAAGAGATCATATAAAATTCCCCGACACTAGAGCTGCTGTTCCGGAAATTAATACTAATAAGAGGATGAAGCCTACAACTAAAGATAGAGTTATATTGAAGAATGATGTTGGTGTTGTTAAATCATCTGGCAAGAGCACTGCAGAAGGATCTAATGTGACCGGAAAACTGCCATCTAGTAAAATTGGTTGTAAGAAGTCTGCTGAAAAGATTATATCTGGTTCAGATATTTCAAAGACACCAGAAGCAAAGGTAATGTCAAGTAAGTGTTTGACTGAAAACAAGAAGTCAATCTCAAAGAATTCGTCTGAAAAGGTGATTTCTTCAGATATTTCAAGGAAGCTTGAGTCAAATAAAAGTTGTTTGACTGAAAGCAAGAAGTCAATCTCAAAGAATTCGTCCGAAAAGGTGATTTCTTCAGATATTTCAAGGAAGCTGGAATCAAGTAAAAGTTGTTTGACTGAAAGCAAGAAGTCAATCTCAAAGTTGTCTGGAAAGATGACTTCTGGTTCAGATATTTCCAGGGAACCAAAATCAAATGAAATATCAGGAAGGCTTTCAACTGAAAACAAGAAGTCAATCTCAAAGAAATTTGAAAAGCCCAAGTGTGCTTCAACGAGTAAAAGTTCTGAGCAAATCAAGCATGACAATCAGGTCGATGATGCAGATAATCAGACTCTGTCAATCAAGCCTATTAGAAGTGTATTTCCTCCACATGATGCTGATTCAGAGAAGGGTTTGGTAGATTCATTTAAAGAAGCTAGATCCTCAATACTGTTGGAGGGTGTGACAGAAAAACACAAGTTGGATGACTCAGTTGACTTGACTACCAAACTGGATAAGGTAATATCCCATGAGCATGGTAATTGCGGGGACAAGCTGATGCTGAATCATGTTCTCTTAGTGTCAACTGATGATCAAAAAGAACAAGCATGTATAAATGAAAGTCGGAAAAGAAGCTCACATCATGCTAACGTTGACCAGGAGAGTGAAAAGAGACAGGAATTTAAGATGAGCAAATCTTGGAAGACATCCGGGAGGAGAACACTAATTGAGAATAATGATAGAAAAGGACTAGGCGTGTCCTCACAATTGTTTAAAAGCGTGGTCTCACCAGCATGGCGATGTATAAAACAAGCCCCTGGCCATCAGGGAAGATCTCATAGTGAGATTGAAAAAGGGACTAGTGTTAAAAATGCAGATGAAAACCAAAATAGGGAAGAAGATAAGCATAGGAGAGAATCAAATGCAAGGCAACAAGTTGGCCCTTCTGGGGTTCAGGATCCTAACTCTACGCAGAATGATCATCTATCTGGTCACAACCCTTCTTGTGCCAACAAACATCCACAACTTAGTACAACATCCAAGTCATTAAATAAGATGAATACACTTGCTGCAGATGAATCAAACCTTGTTAGGACGGGTTCTCCGACTCCTGATCCTCCTATATTTAGTGGAAACGGCACTTTTGAACGTATTGTGCTGCCAGGTTTTGCTGCTGGTCCTAATTTTGCATTTTCACTCCACCATTCAGCAGGTTGGCTTGAAGAGGATTAG 2847 0.3839 MKRRFASLGDEPESETEYQSLIVSNYHLEDNDDEPVSFSVLPIQWSDSEVFNSNDKKKGQLQIFLHGSADNGLQKIFMQVIAWKFDLSGLKPEVSLLSKDKRWIKLLKPRKSFQDTIKTVLITLYFLHCVKKKHRLSVHSFWSNLCKDRDLSSYGFKPSQKDLLDHMTLIGEVTKRDAVLARSKLLLTVLGEKPEDLKPSDEEFEDDDRDNDIIEKADEDSKVEDDLFDSVCAFCDNGGDLIMCDGACMRSFHATKADGRESLCDSLGFTKKEVYDIETFHCKNCEYCQHQCFACGELGSSDKDKGAEVIKCASECCDRFYHPRCIAKLLPSVVKYVAEDLEKNITDGKPFLCPIHFCCVCKGLENKMEPDLQLAVCNRCPKSYHRKCLPIGIAFDGDGVETRAWEGLLPNNRILIYCLNHKIIDKLGTPVRDHIKFPDTRAAVPEINTNKRMKPTTKDRVILKNDVGVVKSSGKSTAEGSNVTGKLPSSKIGCKKSAEKIISGSDISKTPEAKVMSSKCLTENKKSISKNSSEKVISSDISRKLESNKSCLTESKKSISKNSSEKVISSDISRKLESSKSCLTESKKSISKLSGKMTSGSDISREPKSNEISGRLSTENKKSISKKFEKPKCASTSKSSEQIKHDNQVDDADNQTLSIKPIRSVFPPHDADSEKGLVDSFKEARSSILLEGVTEKHKLDDSVDLTTKLDKVISHEHGNCGDKLMLNHVLLVSTDDQKEQACINESRKRSSHHANVDQESEKRQEFKMSKSWKTSGRRTLIENNDRKGLGVSSQLFKSVVSPAWRCIKQAPGHQGRSHSEIEKGTSVKNADENQNREEDKHRRESNARQQVGPSGVQDPNSTQNDHLSGHNPSCANKHPQLSTTSKSLNKMNTLAADESNLVRTGSPTPDPPIFSGNGTFERIVLPGFAAGPNFAFSLHHSAGWLEED* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0118 948 MobiDBLite consensus disorder prediction 620 634 - -
Tpr4g0118 948 MobiDBLite consensus disorder prediction 591 619 - -
Tpr4g0118 948 MobiDBLite consensus disorder prediction 744 772 - -
Tpr4g0118 948 CDD PHD2_NSD 291 356 - -
Tpr4g0118 948 MobiDBLite consensus disorder prediction 744 785 - -
Tpr4g0118 948 MobiDBLite consensus disorder prediction 591 648 - -
Tpr4g0118 948 MobiDBLite consensus disorder prediction 809 868 - -
Tpr4g0118 948 SUPERFAMILY FYVE/PHD zinc finger 351 394 IPR011011 -
Tpr4g0118 948 SMART PHD_3 358 422 IPR001965 -
Tpr4g0118 948 SMART PHD_3 231 286 IPR001965 -
Tpr4g0118 948 SMART PHD_3 291 357 IPR001965 -
Tpr4g0118 948 MobiDBLite consensus disorder prediction 815 847 - -
Tpr4g0118 948 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 228 288 IPR013083 -
Tpr4g0118 948 Pfam Cytosine specific DNA methyltransferase replication foci domain 23 137 IPR022702 -
Tpr4g0118 948 MobiDBLite consensus disorder prediction 848 868 - -
Tpr4g0118 948 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 289 373 IPR013083 -
Tpr4g0118 948 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 586 700 - -
Tpr4g0118 948 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 14 568 - -
Tpr4g0118 948 PANTHER ENHANCED DOWNY MILDEW PROTEIN 586 700 - -
Tpr4g0118 948 PANTHER ENHANCED DOWNY MILDEW PROTEIN 14 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0118 Tpr-Chr4 1394709 1401831 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0118 - - cam:101491311 1159.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4081 3 45341700 45355572 Tpr4g0118 4 1394709 1401831 PCT