Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0116 ATGGGTTTCGTTGTAACTTCGCTAATCTTCCTACTCATCGGAATCATAGCATCCCTTTCTACAAGAATTTTCTTCAATAAAGGACCTTCTGCTAATCTATTTCACCTAACTTTGGTCCTTACTTCAACAACATGCTGCTGGATGATGTGGGCGATTGTATATCTGGCACAGATGAACCCTCTCATAGTTCCCATCTTGAGTGGCGAATAG 210 0.4143 MGFVVTSLIFLLIGIIASLSTRIFFNKGPSANLFHLTLVLTSTTCCWMMWAIVYLAQMNPLIVPILSGE* 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0116 69 PANTHER V-TYPE PROTON ATPASE SUBUNIT E2 1 67 - -
Tpr4g0116 69 Pfam ATP synthase subunit H 3 67 IPR008389 GO:0033179|GO:0046961|GO:1902600
Tpr4g0116 69 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT H 1 67 IPR008389 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0116 Tpr-Chr4 1389731 1392048 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0116 1 67 Primary Pumps ATPases(2) AT4G26710 80.597 6.77e-36 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0116 K02153 - gmx:100527042 121.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0116 4 1389731 1392048 Tpr4g0116 4 1389731 1392048 ECH