Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0114 ATGGCCGAAAATGCAAAGCGTTTCATCATCGGAATCGATCTCGGCACCACCTACTCTTGCGTCGGAGTCTGGCACCACGACAGTGTCCAAATAATCACAAACGACCACGGCAACCGGACCACCCCTTCTTATGTCGCTTTCACGGACTCCGAACGCTTAATTGGTGATGCTGCCAAGAGCCAGGTCATCAGGAACCCCATCAACACTGTCTTCGATGCCAAGCGTTTGATTGGAAGGAGATTCTCTGATGCGTCCGTTCAGAGTGACACGAAGCTATGGCCATTCAAGGTTATTGCTGGTCCGGGCGACAAGCCCATCATTGTTGTTAGCTACAAGAATGAGGAGAAGCAACTCACTGCTGAGGAGATTTCCTCCATGGTCCTCATCAAGATGCGCGAGATCGCCGAGGCTTATCTTGGTTCCACCGTGAAGGACGTTGTTGTCACTGTTCCAGCATACTTCAATGACTCTCAGCGCCAGGCCACCAAGGATGCTGGTGTCATCGCTGGCCTTAATGTCATGCGTATCATCAATGAACCCACTGCTGCTGCCCTTGCCTATGGCCTTGATGATATGGAGGCCGTCGTTGATGGTGAGAAGAACGTTTTGATTTTTGACCTTGGTGGTGGTACTTTTGATGTCTCTCTTCTATCCATTGTAGACAGTGTCTTTGAAGTTCTTGCCACTGCAGGAGACAGCCATCTTGGAGGTGAAGACTTCGATAACAGGATGGTTAAGAATTTTGTTGAGGAGTTCAAGAGGAAGCACGAGAAGGAAATTAGTGGGAACCCGAGGGCTTTAAGAAAGTTGAGGACCACATGTGAAAGGGCAAAGAGGATACTCTCATCCACTGTACAGACCACCATTGAGATTGACTCATTGTATGAAGGTATTGACTTCTATACCACAATCACTCGTGAAAGGTTTGAAGAACTCAACATGGACCTCTTCAGCAACTGCATGGACACTGTTGAGCGGTGTTTGAGGGATGCTATAATGGACAAGAGCAGTGTCCATGATATTGTTCTTGTTGGTGGGTCTACGAGGATCCCAAAAGTGCAACAGTTGTTGCAAGATTTCTTCAATGGGAAGGAGCTCTGCAAGAGCATCAACCCAGATGAGGCAGTTGCTTATGGAGCTGCTCTTCAGGCTGCTATCTTGAACCGTGAGAAGAACAAGAAGGTTAAGGAGCTTACGTTGGTGGATGTCACTGCCCTTTCACTTGGTGTGGAAACTGTTGGTGGTGTCATGACTGTCCTGATTCCAAAAAACCGTCCAATCCCGTACATGAAGGAGCAGGTTTTCTCAACCTACTCCGACAACCAGCTTAGTGTGTTGATCAGGGTGTACGAGGGTGAGAGAACCAGTACCAGGGACAATAACTTGCTAGGTAAATTCGAGCTTTCTGGCATCCTTCCTGCTCCAAGGGGTGTTCCTCAGATCAATGTTTGCTTTCAAATTGATCACAATAGTATCATGAATGTCTCTGCCGAAGACCAGACTACTGGGAAGAAAAACATTATCACTATTAGAAATGGCGAGGGCAGGCTCTCAAAGGAGGAGATTGAGATGATGGTGCAGGAGGCGGAGAAGTACAAGGCTGAGGATGAGGAGCACAAGAAGAACGTAAAGGCCAAGATTGTCTCGGAACAAACGGTGGAGAGGTACCGTTTTACAAAAGATGCTCCAGATCAACACTTGGAGGCACAAGTAGAACATGATACTCGCCATGATCAGATTGCGTTACCATCCCTAAGTCCCAGTTTACAGTATTTCCCTTCCAGAATCTTTGGGTATTATTTCAACTCTACAAAAGTGGCTTCGCAAAAAATTATAAAGGGACTAAAAGATGATAATTGCTATGTTATTGGATTGTATGGAAAGAGAGGCAGTGGTAAAACAGCATTGGTGAAAGCTGAGATGGAAGAGTATGAAAAGATTTTCCGTAGAGTGATATTTCTCTCCGTGTCTGAGAATCAAGATATCAAGAGCATTCGAGTGGGAATTTCTAGCTCCTTGAATGTGTTTGATAAAGATGACAGTGATGGTGCGAGAATAATGAAAATAATTTTGGCATTAGAAAGGAAGGATAGATCTACCCTAGTCATCTTGGATAATTTTCCGTCAAAGTCTAAACTGGAAGAATTGGGAATTCCTTATAATAGCAAACAGTACAAGTTCCTTTTGACCGCACGTGATGAGACAGAGTGCATCTCAATGGGATGTGATCATTTGGTTCTTCTGAAGCCCTTATCCGATGAAGAAGCTTTTACCCTGCTACATAAACTGTCCGGTGTTGAATCCCAAAGTGATCTATTTAAAGTGGTACGAGATGTTGCTTATAAATGCAATGGCTTACCTGGTTTAATTAAAGATGTGGCGTTTTCCTTGAAAAAGAAGCCTATTGAGAAGTGGGAAGAATCCTTAGTCAGTCTAAGCCACTCAACGGCACGCTACCAAATTTTTATCAGTTTTAGAGGAAAGGACACTCGGGAGATTTTCACAAATCATCTCTATGAGGCTTTGTGTAAAGAGGGATTCGAGACCTTCATAGATGATGAAGCATTGGAGGGTGGATCCCCAATTGATAAGCTTCTTGAAGCCATTGAAGAATCAAGGTTTGCAATTGTTGTTTTGTCAGAAAATTTTGCAGACTCTAAATGGTGTCTTAAAGAACTTGTCAAGATTCTTGATTGTCGTAAAAGGAAGAAACAATTGGTTTTGCCAATTTTTTATGAAGTGGAACCAACCGACATAAGGCATCTAAAAGGGAGGTATGGTGAAGCTATGGCCGAACATGAAAAAAAGTTAGCCAAAGATTCTAAGATGGCATTGGAATGGACATTAGCTTTGAGTGAGATTTCCCAATTGAAAGGAGAACATTTCCACATTTCCAACTTCAAAGGAGAGCATTACGAAAGGTACAGAGATCAACTTATTGGAAAGATCATAAGATTTGCCCATAATAATAAACATCGCTTGCATATACAAAGCATGTATATGAACTAG 3009 0.436 MAENAKRFIIGIDLGTTYSCVGVWHHDSVQIITNDHGNRTTPSYVAFTDSERLIGDAAKSQVIRNPINTVFDAKRLIGRRFSDASVQSDTKLWPFKVIAGPGDKPIIVVSYKNEEKQLTAEEISSMVLIKMREIAEAYLGSTVKDVVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAALAYGLDDMEAVVDGEKNVLIFDLGGGTFDVSLLSIVDSVFEVLATAGDSHLGGEDFDNRMVKNFVEEFKRKHEKEISGNPRALRKLRTTCERAKRILSSTVQTTIEIDSLYEGIDFYTTITRERFEELNMDLFSNCMDTVERCLRDAIMDKSSVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAALQAAILNREKNKKVKELTLVDVTALSLGVETVGGVMTVLIPKNRPIPYMKEQVFSTYSDNQLSVLIRVYEGERTSTRDNNLLGKFELSGILPAPRGVPQINVCFQIDHNSIMNVSAEDQTTGKKNIITIRNGEGRLSKEEIEMMVQEAEKYKAEDEEHKKNVKAKIVSEQTVERYRFTKDAPDQHLEAQVEHDTRHDQIALPSLSPSLQYFPSRIFGYYFNSTKVASQKIIKGLKDDNCYVIGLYGKRGSGKTALVKAEMEEYEKIFRRVIFLSVSENQDIKSIRVGISSSLNVFDKDDSDGARIMKIILALERKDRSTLVILDNFPSKSKLEELGIPYNSKQYKFLLTARDETECISMGCDHLVLLKPLSDEEAFTLLHKLSGVESQSDLFKVVRDVAYKCNGLPGLIKDVAFSLKKKPIEKWEESLVSLSHSTARYQIFISFRGKDTREIFTNHLYEALCKEGFETFIDDEALEGGSPIDKLLEAIEESRFAIVVLSENFADSKWCLKELVKILDCRKRKKQLVLPIFYEVEPTDIRHLKGRYGEAMAEHEKKLAKDSKMALEWTLALSEISQLKGEHFHISNFKGEHYERYRDQLIGKIIRFAHNNKHRLHIQSMYMN* 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0114 1002 SUPERFAMILY Toll/Interleukin receptor TIR domain 812 957 IPR035897 -
Tpr4g0114 1002 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 394 547 IPR029047 -
Tpr4g0114 1002 Gene3D - 71 126 - -
Tpr4g0114 1002 SMART AAA_5 619 751 IPR003593 -
Tpr4g0114 1002 PANTHER HEAT SHOCK PROTEIN 70KDA 7 558 IPR013126 GO:0005524|GO:0140662
Tpr4g0114 1002 Coils Coil 522 542 - -
Tpr4g0114 1002 SUPERFAMILY Actin-like ATPase domain 7 190 IPR043129 -
Tpr4g0114 1002 Pfam NB-ARC domain 609 818 IPR002182 GO:0043531
Tpr4g0114 1002 Gene3D - 10 385 - -
Tpr4g0114 1002 Gene3D - 822 989 IPR035897 -
Tpr4g0114 1002 ProSiteProfiles TIR domain profile. 817 979 IPR000157 GO:0007165
Tpr4g0114 1002 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 609 812 IPR027417 -
Tpr4g0114 1002 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 386 570 IPR029047 -
Tpr4g0114 1002 ProSitePatterns Heat shock hsp70 proteins family signature 2. 204 217 IPR018181 -
Tpr4g0114 1002 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 7 558 - -
Tpr4g0114 1002 Pfam TIR domain 819 956 IPR000157 GO:0007165
Tpr4g0114 1002 Pfam Hsp70 protein 9 573 IPR013126 GO:0005524|GO:0140662
Tpr4g0114 1002 SUPERFAMILY Actin-like ATPase domain 197 387 IPR043129 -
Tpr4g0114 1002 SMART till_3 818 957 IPR000157 GO:0007165
Tpr4g0114 1002 CDD HSPA1-2_6-8-like_NBD 10 388 - -
Tpr4g0114 1002 ProSitePatterns Heat shock hsp70 proteins family signature 3. 341 355 IPR018181 -
Tpr4g0114 1002 Gene3D - 750 821 IPR042197 -
Tpr4g0114 1002 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Tpr4g0114 1002 Gene3D - 192 367 - -
Tpr4g0114 1002 Gene3D - 599 745 IPR027417 -
Tpr4g0114 1002 Gene3D Actin; Chain A, domain 4 236 319 - -
Tpr4g0114 1002 PRINTS 70kDa heat shock protein signature 8 21 - -
Tpr4g0114 1002 PRINTS 70kDa heat shock protein signature 36 48 - -
Tpr4g0114 1002 PRINTS 70kDa heat shock protein signature 58 66 - -
Tpr4g0114 1002 PRINTS 70kDa heat shock protein signature 146 166 - -
Tpr4g0114 1002 PRINTS 70kDa heat shock protein signature 210 220 - -
Tpr4g0114 1002 PRINTS 70kDa heat shock protein signature 338 354 - -
Tpr4g0114 1002 PRINTS 70kDa heat shock protein signature 370 390 - -
Tpr4g0114 1002 PRINTS 70kDa heat shock protein signature 397 416 - -
Tpr4g0114 1002 PRINTS 70kDa heat shock protein signature 478 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0114 Tpr-Chr4 1369761 1384936 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0114 1 559 Calmodulin-binding Proteins AT3G12580 78.712 0.0 905
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0114 K03283 - lja:Lj0g3v0120799.1 1090.49