Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0113 ATGGCTGAAAATGCAAAGCGTCTCATCATCGGAATCGACCTTGGCACCACCTATTCTTGCGTCGGAGTCTGGCACCACGGCGGTGTCCAAATCATCACCAACGACCACGGCAACCGGACTACCCCTTCTTACGTTGCTTTCACCGACTCCGAACGCTTAATTGGCGATGCTGCCAAGAGCCAGGTCACCAGGAACCCCGTCAATACAGTCTTCGATGCCAAGCGTTTGATTGGAAGGAGATTCTCTGATGCTTCCGTTCAGAGTGACATGAAGCTATGGCCATTCAAAGTTATTGCTGGTACTGCCGACAAGCCAATCATTGTTGTTAGCTACAAGAATGAGGAGAAGCAACTCACTGCTGAGGAGATTTCCTCCATGGTCCTCCTCAAGATGCGTGAGATCGCCGAGGATTTTGTTGGTTCCACCGTGAAGGACGTTGTTGTCACTGTTCCAGCATACTTCAATGACTCTCAGCGCCAGGCCACCAAGGATGCTGGTGTCATTGCTGGCCTTAATGTCATGCGTATCATCAACGAACCCACTGCTGCTGCCCTTGCCTATGGCCTTGATATGGAGCCTGTTGTTGACGATGAGGATGAAATGAACGTTTTGATTTTTGACCTTGGCGGTGGTACTTTTGATGTCTCTCTTCTATCCATTGTAGACAGTGTCGTTGAAGTTCTTGCCACTGCAGGAGACAGCCATCTTGGAGGTGAAGACTTCGATAACAGGATGGTTGAGAATTTTGTTGAGGAATTCAAGAGGAAGCACGAGAAGGAAATTAGTGGGAACCCGAGGGCTTTAAGAAAGTTGAGGACCGCATGTGAAAGGGCAAAGAGGATACTGTCATCCACTGTACAGACCACCATTGAGATTGACTCATTGTATGAAGGTATTGACTTCTATACCACAATCACTCGTGACAGGTTTGAAGAACTCAACATGGACCTCTTCAGCAACTGCATGGACACTGTTGAGAGGTGTTTGAGGGACGCTAAAATGGACAAGAGCAGTGTACATGATATTGTTCTTGTTGGTGGGTCTACGAGGATCCCAAAAGTGCAACAGTTGTTGAAGGATTTATTCAATGGGAAGGAACTCTGCAAGAGCATCAACCCAGATGAGGCTGTTGCTTATGGAGCTGCTCTCCAGGCTGCTATCTTGAACGATGTGGAGAACAAGAAAGTTCAGGAGCTTACGTTGGTGGATATCACTTCCCTTTCACTTGGTCGTTTCATCATTGGAATCGACCTCGGCACCACCTACTCTTGCGTCGGAGTCTGGCATCACGACACTGTCCAAATCATCACCAACGACCACGGCAACCGGACCACCCCTTCTTACGTCGCTTTCACTGACTCCGAACGCTTAATTGGTGATGCTGCCAAGATCCAGGTCACCAGGAACCCCGTCAACACCGTCTTCGATGCCAAGCGTTTGATTGGAAGGAGATTCTCTGATGCTTCCGTTCAGAGTGACATGAAGCTATGGCCATTCAAGGTTATTGCTGGTCCGGGCGACAAGCCCATGATTGTTGTTAGCTACAAGAATGAGGAGAAGCACTTCACTGCTGAGGAGATTTCCTCCATGGTCCTCATCAAGATGTGTCAGACCGCTGAGGCTTATCTTGGTTCTACCGTGAAGGACGTTGTTATCACTGTTCCAGCATACTTCAATGACTCTCAGCGCCAGGCCACTAAGGATGCTGGAGTCATTGCTGGCCTTAATGTCATGCGTATCATCAATGAACCCACTGCTGCTGCCCTTGCCTATGGCCTTGATATGGAGCCCGTCGTTGATGATGAGAAGGTCGTTTTGATTTTTGACCTTGGTGGTGGTACTTTTGATGTCTCTCTTCTATCCATTGAAGATAGTGTCTTTTTAGTTGATGCCACTGCAGGAGACAGCCATCTTGGAGGTGAAGACTTCGATAACCGGATGGTTGAGAATTTTGTTGAGGAGTTCAAGAGGAAACACGGGAAGGAAATTAGTGGGAACCCGAGGGCTTTAAGAAAGTTGAGGACCGCATGTGAAAGGTCAAAGAGGATACTGTCATCCACTGTACAGACCACCATTGAGATTGACTCATTGTATGAAGGTATTGACTTCTATACCACAATCACTCGTGACAGGTTTGAAGAACTCAACATGGACCTCTTCAACAAGTGCATGGACACTGTTGAGCAGTGTTTGAGGGATGCTAAAATGGACAAGAGCAATGTCCATGATATTGTTCTTGTTGGTGGGTCTACGAGGATCCCAAAAGTGCAACAGCTGTTGCAGGATTTCTTCAATGGGAGGGAGCTCTGCAAGAGCATCAACCCAGATGAGGCTGTTGCTTATGGAGCTGCTCTTCAGGCTGCTATCTTGAACCAGGAGGAGAACGAGAAGATTAAGGAGCTTACGTTGAATGATGTCACTCCGATTTCACTTGGTGTGGAAACTGTTGGTGGTGTCATGACTGTCTTGATTCGAAAGAACCAGACTATTCCGGCCAGGAAGGAGCGGATTTTCTCAACCTACTCAGATAACCAGACTGGTGTGACCATAAAGGTGTACGAGGGTGAGAGAAGTAGGAGCATAGACAACAACTTGCTAGGTAAATTCGAGCTTTCTGGCATCCTTCCTGCTCCACGGGGTGTTCCTCAGATCAATGTTTGCTTTCAAATTGATCACAATGGTATCATGAATGTCTCTGCTGAAGACCAGACTACTGGGAAGAAAAACAATATCACTATTACAAATGGAGAGGGCAGGCTCTCGAAGGAGGAGATTGAGAAGATGGTTCAGGAGGCGGAGAAGTATAGGGCTGAGGACGAGGAGCACAAGAAGAACGTTGAGGCCAAGATTGCCATGGAACAAGAGGTGGAGAGGTATTGTTTTACAAAAGATTCTCCGGATCAACACTTGGAGGCACAAGTAAATCATGATACTTGCCATGATCAAATTACATTACCATCCCTATGTTCAAGTTTACGATCTTTCGCTTCCGGAAACTTTGGGTATTATTTCAACTCTACAAAAGTGGCTTCACAAAAAATTATAAAGGGACTAAAAGACGATAATTGCTATGTTATTGGATTGTATGGAAAGAAAGGAAGTGGTAAAACAACATTGGTGAAAGCTGAGATGGAAGAGTATGAAAAGATTTTCCGTAGAGTGATATTTCTTCCTGTGTCCGAGAATCAAGATATCAAGAGCATTCGAGTGGGAATTTCTAGCTCCTTGAATGTGTTTGATAAAGATGACAGTGATGGTGCGAGAATAATGAAAATAATTTTGGCATTAGAAAGGAAGGATAGAACTACCCTAGTCATCTTGGATAATTTTCCGTCAAAGTCTAAACTGGAAGAATTGGGAATTCCTTATAGTAGCAAACAGTACAAGTTCCTTTTGACCGCACGTGATGAGACAGAGTGCACCTCAATGGGATGTGATCATTTGATTTTTCTAAAGCCCTTATCTGATGAAGAAGCTTTTGCCCTGCTACATAAATTGTCCGGTGTTGAATCCCAAAGTGATCTATTTAAAGTGGTACGAGATGTTGCTTTTAAATGCAATGGCTTACCTGGTTTAATTAAAGATGTGGCGTTTTCCTTGAAAAAGAAGCCTATTGAGAAGTGGGAAGAATCCTTAGTCAGTCTAAGCCACTCAACGGCACGCTACCAAATTTTTATCAGTTTTAGAGGAAAGGACACTCGGGAGATTTTCACAAATCATCTCTATGAGGCTTTGTGTAATGAGGGATTCGAGACCTTCATAGATGATGAAGCATTGGAGGGTGGATCCCCAATTGATAAGCTTCTTGAAGCCATTGAAGAGTCAAGGTTTGCAATTGTTGTTTTGTCAGAAAATTTTGCAGACTCTAAATGGTGTCTTAAAGAACTTGTCAAGATTCTTGATTGTCGAAAAAGGAAGAAACAATTGGTTTTGCCAATTTTTTATGAAGTGGAACCAACCGACATAAGACATCTAAAAGGGAGGTATGGTGAAGCTATGGCCGAACATGAAAAAAAGTTAGCCAAAGATTCTAAGACGGTATTGGAATGGACATTAGCTTTGAGTGATATTTCCCAATTGAAAGGAGAACATTTCCATAGTTCCAACTTCAAAGGAGAGCATTCCGAAAGGTACAGAGACCAACTTATCGGAAAGATCATAAGATTTGCCCATAATAACAAACATCGCTTGCATATACAAAGCATGTATATGAATTAG 4218 0.4445 MAENAKRLIIGIDLGTTYSCVGVWHHGGVQIITNDHGNRTTPSYVAFTDSERLIGDAAKSQVTRNPVNTVFDAKRLIGRRFSDASVQSDMKLWPFKVIAGTADKPIIVVSYKNEEKQLTAEEISSMVLLKMREIAEDFVGSTVKDVVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAALAYGLDMEPVVDDEDEMNVLIFDLGGGTFDVSLLSIVDSVVEVLATAGDSHLGGEDFDNRMVENFVEEFKRKHEKEISGNPRALRKLRTACERAKRILSSTVQTTIEIDSLYEGIDFYTTITRDRFEELNMDLFSNCMDTVERCLRDAKMDKSSVHDIVLVGGSTRIPKVQQLLKDLFNGKELCKSINPDEAVAYGAALQAAILNDVENKKVQELTLVDITSLSLGRFIIGIDLGTTYSCVGVWHHDTVQIITNDHGNRTTPSYVAFTDSERLIGDAAKIQVTRNPVNTVFDAKRLIGRRFSDASVQSDMKLWPFKVIAGPGDKPMIVVSYKNEEKHFTAEEISSMVLIKMCQTAEAYLGSTVKDVVITVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAALAYGLDMEPVVDDEKVVLIFDLGGGTFDVSLLSIEDSVFLVDATAGDSHLGGEDFDNRMVENFVEEFKRKHGKEISGNPRALRKLRTACERSKRILSSTVQTTIEIDSLYEGIDFYTTITRDRFEELNMDLFNKCMDTVEQCLRDAKMDKSNVHDIVLVGGSTRIPKVQQLLQDFFNGRELCKSINPDEAVAYGAALQAAILNQEENEKIKELTLNDVTPISLGVETVGGVMTVLIRKNQTIPARKERIFSTYSDNQTGVTIKVYEGERSRSIDNNLLGKFELSGILPAPRGVPQINVCFQIDHNGIMNVSAEDQTTGKKNNITITNGEGRLSKEEIEKMVQEAEKYRAEDEEHKKNVEAKIAMEQEVERYCFTKDSPDQHLEAQVNHDTCHDQITLPSLCSSLRSFASGNFGYYFNSTKVASQKIIKGLKDDNCYVIGLYGKKGSGKTTLVKAEMEEYEKIFRRVIFLPVSENQDIKSIRVGISSSLNVFDKDDSDGARIMKIILALERKDRTTLVILDNFPSKSKLEELGIPYSSKQYKFLLTARDETECTSMGCDHLIFLKPLSDEEAFALLHKLSGVESQSDLFKVVRDVAFKCNGLPGLIKDVAFSLKKKPIEKWEESLVSLSHSTARYQIFISFRGKDTREIFTNHLYEALCNEGFETFIDDEALEGGSPIDKLLEAIEESRFAIVVLSENFADSKWCLKELVKILDCRKRKKQLVLPIFYEVEPTDIRHLKGRYGEAMAEHEKKLAKDSKTVLEWTLALSDISQLKGEHFHSSNFKGEHSERYRDQLIGKIIRFAHNNKHRLHIQSMYMN* 1406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0113 1405 Gene3D - 596 770 - -
Tpr4g0113 1405 Gene3D - 192 368 - -
Tpr4g0113 1405 Gene3D - 1003 1149 IPR027417 -
Tpr4g0113 1405 Pfam Hsp70 protein 9 410 IPR013126 GO:0005524|GO:0140662
Tpr4g0113 1405 Pfam Hsp70 protein 413 962 IPR013126 GO:0005524|GO:0140662
Tpr4g0113 1405 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Tpr4g0113 1405 Coils Coil 922 949 - -
Tpr4g0113 1405 Gene3D - 1225 1392 IPR035897 -
Tpr4g0113 1405 SUPERFAMILY Actin-like ATPase domain 411 595 IPR043129 -
Tpr4g0113 1405 ProSitePatterns Heat shock hsp70 proteins family signature 2. 607 620 IPR018181 -
Tpr4g0113 1405 SUPERFAMILY Toll/Interleukin receptor TIR domain 1215 1360 IPR035897 -
Tpr4g0113 1405 CDD HSPA1-2_6-8-like_NBD 414 791 - -
Tpr4g0113 1405 Gene3D - 475 530 - -
Tpr4g0113 1405 Gene3D - 71 126 - -
Tpr4g0113 1405 SMART AAA_5 1022 1154 IPR003593 -
Tpr4g0113 1405 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 8 410 - -
Tpr4g0113 1405 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 414 955 - -
Tpr4g0113 1405 Gene3D Actin; Chain A, domain 4 237 320 - -
Tpr4g0113 1405 Gene3D Actin; Chain A, domain 4 639 722 - -
Tpr4g0113 1405 PANTHER HEAT SHOCK PROTEIN 70KDA 8 410 IPR013126 GO:0005524|GO:0140662
Tpr4g0113 1405 PANTHER HEAT SHOCK PROTEIN 70KDA 414 955 IPR013126 GO:0005524|GO:0140662
Tpr4g0113 1405 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1012 1215 IPR027417 -
Tpr4g0113 1405 Pfam NB-ARC domain 1012 1221 IPR002182 GO:0043531
Tpr4g0113 1405 SUPERFAMILY Actin-like ATPase domain 600 790 IPR043129 -
Tpr4g0113 1405 SUPERFAMILY Actin-like ATPase domain 198 388 IPR043129 -
Tpr4g0113 1405 ProSitePatterns Heat shock hsp70 proteins family signature 3. 744 758 IPR018181 -
Tpr4g0113 1405 Gene3D - 10 386 - -
Tpr4g0113 1405 Gene3D - 414 788 - -
Tpr4g0113 1405 Gene3D - 1153 1224 IPR042197 -
Tpr4g0113 1405 Pfam TIR domain 1222 1365 IPR000157 GO:0007165
Tpr4g0113 1405 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Tpr4g0113 1405 ProSitePatterns Heat shock hsp70 proteins family signature 1. 416 423 IPR018181 -
Tpr4g0113 1405 PRINTS 70kDa heat shock protein signature 412 425 - -
Tpr4g0113 1405 PRINTS 70kDa heat shock protein signature 440 452 - -
Tpr4g0113 1405 PRINTS 70kDa heat shock protein signature 462 470 - -
Tpr4g0113 1405 PRINTS 70kDa heat shock protein signature 550 570 - -
Tpr4g0113 1405 PRINTS 70kDa heat shock protein signature 613 623 - -
Tpr4g0113 1405 PRINTS 70kDa heat shock protein signature 741 757 - -
Tpr4g0113 1405 PRINTS 70kDa heat shock protein signature 773 793 - -
Tpr4g0113 1405 PRINTS 70kDa heat shock protein signature 800 819 - -
Tpr4g0113 1405 PRINTS 70kDa heat shock protein signature 881 897 - -
Tpr4g0113 1405 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 796 953 IPR029047 -
Tpr4g0113 1405 SMART till_3 1221 1360 IPR000157 GO:0007165
Tpr4g0113 1405 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Tpr4g0113 1405 ProSiteProfiles TIR domain profile. 1220 1382 IPR000157 GO:0007165
Tpr4g0113 1405 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 789 970 IPR029047 -
Tpr4g0113 1405 SUPERFAMILY Actin-like ATPase domain 7 191 IPR043129 -
Tpr4g0113 1405 CDD HSPA1-2_6-8-like_NBD 10 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0113 Tpr-Chr4 1363446 1376408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0113 414 953 Calmodulin-binding Proteins AT3G12580 80.185 0.0 905
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0113 K03283 - sspl:121777062 1481.46