Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr4g0108 | ATGGAACCGACGACGGATCCGCCACCGGAGATTGAGAACGGAGGAAGAGAGGAACAACAACGGTGCAACAAGAAAGCGAAGGTTGATGTAATTGAGAATTCGGAATCGGTGGAATTGAAACGAGTGGCGGAGATTGTTTTGGTTTTATCAACGATGGCGACGATGCGTGGCGGAAAGAAACCGAGTGATGCCGAGGTTGAGCTTATGAGAGAGGCGAGGAATAAGCTTGCGGTTTTGTGTCAAGGGATTGCTCCGAAGGATATTGTTGCTGGTGAAGCTATTGGTTCTGTTATTCAGGATCTTGGTTTGAATGTTAAGGTTGAGGACCAAAGGTTAGGGTTTCGGTCCACACCTAAGATGTCTATTGCTGAACGGTACTCCTTTGCGAAAACAAAGATGGAGGAATCAAAGAAATTCTCTGCACCTTCTACAACATATACATCTCAGCCCTTGCAAACAAACACCAGTGGAATGGTTGACAATCGTGTGCCGACAAATGCTGTTCGAATGTTCGTGCCTGATAAATCAAACCACACGACAATATCATCCACAGTTTCCATGGTGTCTATTCCTCCCCATCTTTCTGCAGGATCTTCTGCAGCATTGCAGTATCAATCAACCAGCAATGAAGTTAGACCGCCCATGGTTTCTGGTGCAATACCTAACAATCACATGGGAAGAAATCCATCTTCTGTAGCATTGCCTAGAGTTGAAAACCCACAGTTTAAAGTTACTGGAGGAATGAGTGGGGCTCCTTATGTGCTTCAGGTCCAAGCAAACTCACTGGCAAACCAATCATCGGTGAATGCTCCTACATGGTCAATACAGACTCAACCTGTGTCATTAGCTAGAAATGTATCAGAAAACAAGGTGCCACCTGCTCATAACTCTGTCGTCAAGGTTGAGGGAACTGCTGGTGCAACCATATCAAGGGCAGGTCCACAAGTAACAACAGCCCAGAGCGTTAGACCATTTATTACTCACATGGGACCTGGAAATTTGTCTAGCATGCACCAGTCATTACAGGGTGGGAATATGGTTCAACCTCCTACGATTCCTAGTCACTCTGATATTGCAAAGGTTGTCCAGAAATTGTTACTACCGAAGGTTCCTGACCATCCCACATGGACTCCCCCATCAAGGGATTATATGAGTAAGACTTTCACATGTCAGACGTGTGAGCTCACTGTCAACGAGGTTGATACCGTTCTTATGTGTGATGCTTGTGAAAAGGGATTTCACTTGAAGTGCCTGCAGCCAGCAGTCATTAGGGGAATTCATAATAGAGTTGATTGGCACTGCATGAGGTGCTTGAGTTTAAGTGGGGGAAAGCCTTTGCCTCCAAAATATGGCCGTGTGATGAGATCCTCAATTACATCACCAAGTTTTCCCTCTAATACAGTGGGTATTCAACCATCTTCAGAGAAGAAAGCAGAGAACTTAGATTCAAAGGTCAGCCCACAGACATTTACAATAAATGGAAACTCTGTTCCAACTGTTTCCAGTGCCAATCACAATACTGAGCTGTCATTTGACTCAAATACCCCAGATACGAGAGATATACAAGGTTCCAACATTTCATCTAGCATTGAAACCATTGATGAGAAGCCTGATCCAAACATATGTATGAAATCTGCTGCTTGTAGGGCTTCCACTGGCTTGCAGGGTGAAAGTTATGTTGAACAAATAGATTCAAAGGCTTTGACCTGTAAAGATACTTCAGAATCTGAAACTCTTCCTAAATTATCTGAGCCGGCTAAATGTGAAAATTTGCATCCATCACGAGATTCTCAAGTTGAGATGACAGTGTCACACGACAGTGCTGAAATATCATCAGATAGACACGTTAGCAGTAGTTTGACGATTAGTGATAAAAAAGAATCTCATGGAGGAGAAAATATAACTTCTGATATCAACCACGGTGACCTAGATGTTGCACAACCAAATTCTGTCGGAGGTTCTGGAACTAATACTGAAGGTATTCAGCACTCTGCTTTATCTTCAGATAGCTCACATGCTGTAGAATGGATTGGTGATGTTGTACAACTTGTAGACGAGAAAAAGTATTATCAATCTTGCTGCATTGATGGAGTAACATATAGGCTGCAGGGTCATGCTTTTTTCACATCCAACCATGGCAAATTAACCCCTTCTAAACTTCAGTCTATGTGGGAAGATTCCAAAACTGGGGTGAAGTGGGTTAAGGCAACAAAGTGCTACTTCCCTGATGATTTGCCGGGGAATATCAGTCATCCTTGTATATCTGAAGTCAATGAGGTTTATGAATCTAATAGTGATAGAATAGAAATGGCTAGCTCTATCCGAGGCCCCTGTGTAGTCCTTCCATACGATAAATTTAAACAAGAAAATGACAGAAGATGTCAATTTGGAATTGAGGCAAGTGCTAGTGTACAGCCTATTTTCCTTTGCAGGTGGTTTTATGATGAAATCAAAAAGTCATTTCAACCTGTTATCAGTTGA | 2481 | 0.4281 | MEPTTDPPPEIENGGREEQQRCNKKAKVDVIENSESVELKRVAEIVLVLSTMATMRGGKKPSDAEVELMREARNKLAVLCQGIAPKDIVAGEAIGSVIQDLGLNVKVEDQRLGFRSTPKMSIAERYSFAKTKMEESKKFSAPSTTYTSQPLQTNTSGMVDNRVPTNAVRMFVPDKSNHTTISSTVSMVSIPPHLSAGSSAALQYQSTSNEVRPPMVSGAIPNNHMGRNPSSVALPRVENPQFKVTGGMSGAPYVLQVQANSLANQSSVNAPTWSIQTQPVSLARNVSENKVPPAHNSVVKVEGTAGATISRAGPQVTTAQSVRPFITHMGPGNLSSMHQSLQGGNMVQPPTIPSHSDIAKVVQKLLLPKVPDHPTWTPPSRDYMSKTFTCQTCELTVNEVDTVLMCDACEKGFHLKCLQPAVIRGIHNRVDWHCMRCLSLSGGKPLPPKYGRVMRSSITSPSFPSNTVGIQPSSEKKAENLDSKVSPQTFTINGNSVPTVSSANHNTELSFDSNTPDTRDIQGSNISSSIETIDEKPDPNICMKSAACRASTGLQGESYVEQIDSKALTCKDTSESETLPKLSEPAKCENLHPSRDSQVEMTVSHDSAEISSDRHVSSSLTISDKKESHGGENITSDINHGDLDVAQPNSVGGSGTNTEGIQHSALSSDSSHAVEWIGDVVQLVDEKKYYQSCCIDGVTYRLQGHAFFTSNHGKLTPSKLQSMWEDSKTGVKWVKATKCYFPDDLPGNISHPCISEVNEVYESNSDRIEMASSIRGPCVVLPYDKFKQENDRRCQFGIEASASVQPIFLCRWFYDEIKKSFQPVIS* | 827 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr4g0108 | 826 | Pfam | PHD-finger | 390 | 438 | IPR019787 | - | |
Tpr4g0108 | 826 | ProSitePatterns | Zinc finger PHD-type signature. | 390 | 437 | IPR019786 | - | |
Tpr4g0108 | 826 | MobiDBLite | consensus disorder prediction | 462 | 476 | - | - | |
Tpr4g0108 | 826 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 11 | 825 | - | - | |
Tpr4g0108 | 826 | MobiDBLite | consensus disorder prediction | 604 | 632 | - | - | |
Tpr4g0108 | 826 | SUPERFAMILY | FYVE/PHD zinc finger | 381 | 445 | IPR011011 | - | |
Tpr4g0108 | 826 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 11 | 825 | - | - | |
Tpr4g0108 | 826 | SMART | PHD_3 | 389 | 438 | IPR001965 | - | |
Tpr4g0108 | 826 | ProSiteProfiles | Zinc finger PHD-type profile. | 387 | 440 | IPR019787 | - | |
Tpr4g0108 | 826 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 336 | 438 | IPR013083 | - | |
Tpr4g0108 | 826 | Gene3D | - | 677 | 825 | IPR043151 | - | |
Tpr4g0108 | 826 | CDD | BAH | 697 | 824 | - | - | |
Tpr4g0108 | 826 | ProSiteProfiles | BAH domain profile. | 698 | 825 | IPR001025 | GO:0003682 | |
Tpr4g0108 | 826 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Tpr4g0108 | 826 | MobiDBLite | consensus disorder prediction | 462 | 482 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr4g0108 | Tpr-Chr4 | 1321940 | 1329723 | Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | PHD | Tpr4g0108 | PHD | 4.5e-07 | CL0390 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr4g0108 | - | - | gmx:100807139 | 1185.63 |