Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0081 ATGCCACAAAATCTTATAGAGCCTCGTCTTGTAGCAAGAAAGTTCCTAGCCAAACCTCAACGAGAAGGTGTTGGTGCTGTTGTTAGAAGAAGCATAGGAAGATTTGAGCTCAAGTATTTTGATCCTTTCCTTGTCTTGGATGAATTTTCAGTTACTGCTCCTTCTGGATTTCCTGATCATCCACATAGAGGATTTGAGACAGTCACATATATGTTACAGGGTGCTGTAACACATGAAGATTTTGAAGGACACAAAGGAACAATTGAAGCTGGTGACTTGCAATGGATGACTGCTGGTAGAGGGATAGTGCACTCAGAAATGCCTGCAGCTCAAGGAATCCAAAAGGGTCTACAACTATGGATCAACCTTGCTTCCCAACATAAAATGATTGAACCAAGGTACCAAGAAATTTTAAGCAAGGACATAGTAGAAACTATGAAAGATGGTATCATGGTTAGAGTTATAGCAGGGGAAGCACTTGGAGTAAAGTCACCAATTTACACAAGAACACCAACAATGTATTTGGATTTTACTCTTGAACCAGGATCACACCTACAACAACTTGTACCAAAATCTTGGAATGCTTTTGTGTACATCTTAGAAGGAGAGGGTATTTTTGGAAATAAAAAATCTCATCCTACAACTTCTCACCATATTGTCCTTCTAGGTTTAGGGGATGGTCTAGAGGCATGGAATAAATCATCTAAGGTTCTTAGGTTTATTTTAGTTGGAGGTGAACCATTAGGTGAACCAATAGTACAATTTGGACCCTTTGTGATGAATACTCAACAAGAGATTGACCAAACTATTGATGATTTTGAAAACTATACCAATGGATTTGAGAAAGCAAGACATTGGAAGTCACAAAGTGCAGTTGGTGTAGAGTTTTGA 891 0.3872 MPQNLIEPRLVARKFLAKPQREGVGAVVRRSIGRFELKYFDPFLVLDEFSVTAPSGFPDHPHRGFETVTYMLQGAVTHEDFEGHKGTIEAGDLQWMTAGRGIVHSEMPAAQGIQKGLQLWINLASQHKMIEPRYQEILSKDIVETMKDGIMVRVIAGEALGVKSPIYTRTPTMYLDFTLEPGSHLQQLVPKSWNAFVYILEGEGIFGNKKSHPTTSHHIVLLGLGDGLEAWNKSSKVLRFILVGGEPLGEPIVQFGPFVMNTQQEIDQTIDDFENYTNGFEKARHWKSQSAVGVEF* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0081 296 CDD cupin_pirin_C 171 247 - -
Tpr4g0081 296 PIRSF Pirin 7 287 IPR012093 -
Tpr4g0081 296 Gene3D Jelly Rolls 22 274 IPR014710 -
Tpr4g0081 296 Gene3D Jelly Rolls 143 248 IPR014710 -
Tpr4g0081 296 PANTHER OS09G0484800 PROTEIN 4 292 - -
Tpr4g0081 296 CDD cupin_pirin_N 26 123 - -
Tpr4g0081 296 PANTHER PIRIN-RELATED 4 292 IPR012093 -
Tpr4g0081 296 Pfam Pirin C-terminal cupin domain 174 278 IPR008778 -
Tpr4g0081 296 SUPERFAMILY RmlC-like cupins 9 288 IPR011051 -
Tpr4g0081 296 Pfam Pirin 28 121 IPR003829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0081 Tpr-Chr4 965965 969451 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0081 3 284 Calmodulin-binding Proteins AT3G59220 58.451 2.24e-125 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0081 K06911 - gmx:100790637 552.747