Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0079 ATGGAAAGTTTGCAGAAATTCACAAGAGCGGTTACAACATGGAAAATTTGGGGACTCTCAGGAAAAGCATTAGATCCAAGAAGCAAGCGCGTGCAAATATGGAACCGCGCGCTGTTATTAGCGCGCGGTGTTGCTTTGGTGATGGATCCACTGTTTGTCTATGCACTTTCCATAGGGAGAAAAGGAGGTTCGCCATGTTTGTATATGGACGGAGGGTTGGCGTTGGTTTTCACCGTGGCGCGTTCGCTTCTTGATGCAGTTCATTTGCTTCACATTGGGTTGCAGCTTAGATCAGCATATGTGTCTAGAAAATCCCTTGTTGTTGGATGTGGGGAACTTGTGTGGGACGCACGCGCCACTGCTTCTGCCTATATGAGAGCTTTCAAAGGATTCTGGTTTGATATTTTTGTTATTCTTCCTGTGCCTCAGGTTGTATTTTGGATAGTAGTACCAAAATTGATAAGAGAAGAGAGGATTAAAATAATGATGACAACAATGCTATTGATGTTTTTGTTCCAATTTCTCCCTAAGGTTTGTCATAGCATATCCATGATGAGAAGAATGCAAAATGTCACGGGCTATATCTTTGGCACCCTTTCTTGGGGATTTGGACTCAATCTCATAGCTTATTTTTTTGCCTCTCATGTTGTTGGAGCGTGTTGGTATGTCCTTGCGATTCAACGCATTGCATCATGCCTTCAACAGCAATGTGAAAGATCTGCTGGATGCAATCTCGCTCTATCATGCTCAGAGGAGATATGTTCTCGGTCATTGTGTGGTGGAAACTCAACAATGATGAGTAAGCTTGTGTGCTTAGATGTTAAAGGACCTTTCAGACATGGCATCTACCGATGGGCACTTAATGTTGTATCCAGCAATTCCTTGGCTTTCAGGATTCTTTATCCCATTTATTGGGGTTTGACGACCTTCAGCACTTTTGGAAATGATCTTGAACCCACAAGTAACTGGCTAGAAGTGATTTTCAGTATATGCATTATAGTTGCCGGACTACTACTTTTCACTCTGTTTATTGGTAACATTCAGGTATTCTTAGATGGAGTCATGGAAAAGAAGAGAAACATGCAGCTTAGAAGTCGTGACATGGAATGGTGGATGAGGAGGAGGCAGTTGCCCTCCCGATTAAGACAAAGAGTTCGGCATTTTGAACGTGAGAGATGGGCAGCCACAGGAGGAGAAGATGAAATGGAACTTATGAAGGACTTACCCGAGGGTCTGAGGAGAGACATTGAGCAGTATCTGATAGAGGATGATGGAGACCAAAGAGCATAG 1290 0.4333 MESLQKFTRAVTTWKIWGLSGKALDPRSKRVQIWNRALLLARGVALVMDPLFVYALSIGRKGGSPCLYMDGGLALVFTVARSLLDAVHLLHIGLQLRSAYVSRKSLVVGCGELVWDARATASAYMRAFKGFWFDIFVILPVPQVVFWIVVPKLIREERIKIMMTTMLLMFLFQFLPKVCHSISMMRRMQNVTGYIFGTLSWGFGLNLIAYFFASHVVGACWYVLAIQRIASCLQQQCERSAGCNLALSCSEEICSRSLCGGNSTMMSKLVCLDVKGPFRHGIYRWALNVVSSNSLAFRILYPIYWGLTTFSTFGNDLEPTSNWLEVIFSICIIVAGLLLFTLFIGNIQVFLDGVMEKKRNMQLRSRDMEWWMRRRQLPSRLRQRVRHFERERWAATGGEDEMELMKDLPEGLRRDIEQYLIEDDGDQRA* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0079 429 SUPERFAMILY Voltage-gated potassium channels 25 351 - -
Tpr4g0079 429 SUPERFAMILY cAMP-binding domain-like 356 421 IPR018490 -
Tpr4g0079 429 Pfam Ion transport protein 32 348 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Tpr4g0079 429 Gene3D - 66 352 - -
Tpr4g0079 429 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2-LIKE 7 423 - -
Tpr4g0079 429 Gene3D Helix hairpin bin 356 420 - -
Tpr4g0079 429 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 7 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0079 Tpr-Chr4 903540 906837 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0079 15 423 Ion Channels AT5G15410 68.810 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0079 K05391 - gmx:100810471 637.876