Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0070 ATGGCTTCCACTTACCGTGACCGTACGTCGGAGTTACGATCACTGACGGAGACTCTAAAGAAGATCGGCGGCGGAGGAGGTGGAGCCACATCACCGCCTAATCAACAACCGTCTACCTCTCAAAATTCCTATTCAAGATCCGAATTCAACCGAAAAGCATCACAAATCGGATTTGGAATCCATGAAACTTCACAGAAAATCGCTAGACTCGCTAAGTTGGCGAAGCAATCGTCGATGTTTAATGATCCAATTATGGAAATTCAAGAACTAACTGCATTCATTAAGACTGATATAACGACGTTGAATGCGGCTGTTTTGGATTTGCAAAATATTCAGAAAATTGATTTGGCTGATGAGATTTACTCAGAAGATAGAGTTGTACATTCCAATGCTGTTTGTGATGACTTGAAGAACAAGCTCATGGGAGCCACAAAGCATCTTCAAGATGTTTTGACTACTAGGACAGAGATTACCATCAAATGGAATTCCAGTTGGCAATCAGCTAAGAATCTGCGTTTTGGAAACGTGAAACGCAATACAGTGTATTGTTCTTCTATC 558 0.414 MASTYRDRTSELRSLTETLKKIGGGGGGATSPPNQQPSTSQNSYSRSEFNRKASQIGFGIHETSQKIARLAKLAKQSSMFNDPIMEIQELTAFIKTDITTLNAAVLDLQNIQKIDLADEIYSEDRVVHSNAVCDDLKNKLMGATKHLQDVLTTRTEITIKWNSSWQSAKNLRFGNVKRNTVYCSSI 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0070 186 MobiDBLite consensus disorder prediction 29 47 - -
Tpr4g0070 186 PANTHER SYNTAXIN 4 156 IPR045242 -
Tpr4g0070 186 MobiDBLite consensus disorder prediction 18 47 - -
Tpr4g0070 186 Gene3D - 41 172 - -
Tpr4g0070 186 PANTHER SYNTAXIN-31 4 156 - -
Tpr4g0070 186 SUPERFAMILY t-snare proteins 45 165 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0070 Tpr-Chr4 793915 797677 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0070 1 156 SNARE and Associated Proteins AT5G05760 61.538 1.90e-58 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0070 K08490 - gmx:100777383 198.364