Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0065 ATGGAGTGTTATGCTTGCACACAAGTAGGTGTGCCACTTTTCCACTCCACCAGCTGTGATAGCTACGGAAAACCTTTCGATCCAACAAGCAAGCGCGTGAAAATATGGAACCGCGCTTTGTTATTTGCGCGTGGTGTTGCATTGGCCATTGACCCCATATTTTTCTACGCGCTGTCCATAGGGAGAGGAGGTTCCCCGTGTTTGTATATGGACGGTGGTTTGGCATTCCTTGCTACTGTGGCGCGGTCGGCTATTGATGCGATTCATCTGCTTCATATTCTGCTGCAGTTTAGATTACCGTATGTGTTGAGAGAATCACTTGTGGTTGGACGTGGGAGACTCGTGTGGGACGCACGTGCCATTGCTCGTCATTATATGAGATCTCTCAGAGGCTTTTGGTTCGATGTTTTTGTTATTCTTCCGGTGCCTCAGGTTGTATTTTGGGTAGTAGTACCAAAATTGATAAAAGAAGAGAGGATTAAAATACTGATGACAACAATGCTATTGATTTTTTTGTTCCAATTTCTCCCTAAGGTTTACCATAGCATATCCATGATGAGAAGAATGCAAAAAGTCACAGGCTATATCTTTGGCACCATTTGTTGGGGATTTGGACTCAATCTTATAGCTTATTTCTTTGCCTCTCAGGTTGCTGGAGCGTGTTGTTATGTCCTTGCCATTCAACGCGTTGCATCTTGTCTTCAACAGCAATGTGACAGGTCTGTTGGATGCAGTCTCCCTCTGTCATGCTCAGAGGAAATATGTTATCGGTCATACTCATTGTTTCCACCAGGAACCATTGGAAATTCATGTGGTGGAAACTCAACATTGATACCGCCTGTGTGCTTAGATGTCGAAGGACCTTTCAGATATGGGATCTACAAATGGGCACTTCCTGTCATATCCAGCGATTCCTTGGCTGACAAGATTCTTGATCCCATTTTTTGGGGTTTGAAGACTTTCAGCACTTTTGGAAATAATCTTGAACCCACAAGTAACTGGCTAGAAGTGATTTTCAGTATATGCATTGTACTTGCTGGAATACTACTTTCCACTCTGTTGATTGGTAACATCCAGGTATTCTTAGAAGGAGTCCTGGCAAAGAAGAGAAACACGCAGCTTAGACGTCGTGACATGGAATGGTGGATGAGGAGGAGGCAGTTGCCATCCCGGTTAAGACAAAGGGTTCGGCATTTTGAACGTCAGAGATGGGCAGCCATGGGAGGAGAAGATGAGATGGAGGAACTTATCAAAGACTTACCCGAGGGCCTGAGGAGAGACATCAAGCGCTACCTTTGCTTGGACCTGATTAAAAAGGTACCATTATTCCATAACTTGGATGATCTTATTCTTGACAACATCTGTGACAGAGTGAAGCCCCTAGTCTTCTCTAGAGATGAAAAGATAATTAGAGAAGGTGATCTTGTACCCAGGATGGTGTTTATTGTCCGTGGAAGCATAAGGCGAACCCAAAATCTCAGCAAAGGCATGGTAGCAACAAGTGTCCTTGAACCAGGTGGCTTTTTAGGCGATGAACTTCTTTCATGGTGCCTCAGACGCCCTTTTATAGACCGGCTTCCGGCCTCCTCAGCTACATTTGTGTGTCTCGAATCAACAGAAGCATTCGGTCTTGATGCTCAAAATTTGAGGTACATAACTGATCACTTCCGGTACAAATTCGCAAACGAGAGGCTTAAGAGAACGGCGAGATACCACTCGTCGAATTGGAGAACATGGGCTGCTGTCAACATTCAAGTTGCTTATAGACGTTACAGGCAAAGGACTAGAGGTCTAGTGACTCTTGTAAGGGACAATGGAGGCACCGAGCGCACACTCTGGCAGTATGCTGCAATGTTCACGTCAACTAGGCCACATGATCACCTTGAATGA 1890 0.4503 MECYACTQVGVPLFHSTSCDSYGKPFDPTSKRVKIWNRALLFARGVALAIDPIFFYALSIGRGGSPCLYMDGGLAFLATVARSAIDAIHLLHILLQFRLPYVLRESLVVGRGRLVWDARAIARHYMRSLRGFWFDVFVILPVPQVVFWVVVPKLIKEERIKILMTTMLLIFLFQFLPKVYHSISMMRRMQKVTGYIFGTICWGFGLNLIAYFFASQVAGACCYVLAIQRVASCLQQQCDRSVGCSLPLSCSEEICYRSYSLFPPGTIGNSCGGNSTLIPPVCLDVEGPFRYGIYKWALPVISSDSLADKILDPIFWGLKTFSTFGNNLEPTSNWLEVIFSICIVLAGILLSTLLIGNIQVFLEGVLAKKRNTQLRRRDMEWWMRRRQLPSRLRQRVRHFERQRWAAMGGEDEMEELIKDLPEGLRRDIKRYLCLDLIKKVPLFHNLDDLILDNICDRVKPLVFSRDEKIIREGDLVPRMVFIVRGSIRRTQNLSKGMVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFVCLESTEAFGLDAQNLRYITDHFRYKFANERLKRTARYHSSNWRTWAAVNIQVAYRRYRQRTRGLVTLVRDNGGTERTLWQYAAMFTSTRPHDHLE* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0065 629 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2-LIKE 19 629 - -
Tpr4g0065 629 Gene3D - 73 364 - -
Tpr4g0065 629 Pfam Ion transport protein 35 359 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Tpr4g0065 629 SUPERFAMILY Voltage-gated potassium channels 27 363 - -
Tpr4g0065 629 CDD CAP_ED 442 552 IPR000595 -
Tpr4g0065 629 Gene3D Helix hairpin bin 367 433 - -
Tpr4g0065 629 ProSiteProfiles cAMP/cGMP binding motif profile. 442 552 IPR000595 -
Tpr4g0065 629 Gene3D Jelly Rolls 440 558 IPR014710 -
Tpr4g0065 629 SMART cnmp_10 442 568 IPR000595 -
Tpr4g0065 629 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 19 629 - -
Tpr4g0065 629 SUPERFAMILY cAMP-binding domain-like 368 556 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0065 Tpr-Chr4 713005 717205 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0065 1 629 Ion Channels AT5G15410 68.538 0.0 880
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0065 K05391 - gmx:100798823 1008.44