Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0060 ATGTCGTCGGCTTCAGAGATTCTCCAACAACTTGAATCACTCAAGAACGAAAAAACCAAAATTGAACACAAAATATCACATCTTGAAGCTCAGTTGAAAGATATTAATCTCCAAAAACAAGTTTCTGCATCATCCAATGGTTCTTCACCTTACGCTACAAATGGTTTGGAACCTCACATGATTCACAGATACAGTCGCCACCTTGTTCTTCCTTCTTTTGGTGTTCAAGGGCAAGCAAATCTATTGAAGTCATCAATTTTAGTTGTGGGAGCGGGAGGATTGGGTGCTCCAGCGTTGTTATATTTTGCAGCTGCTGGTGTTGGTAAATTGGGTATTGTTGATCATGACAAGGTTGAGCTGAATAATATGCATAGACAGATTATACACACCGAAGCATATATTGGTCAGCCAAAAGTGAAATCCGCTGCTGCTGCTTGTCGCTCGGTCAACTCATCTATTGAAATTGTGGAACATGAAGAAGCTTTGCGGACTTCCAATGCTTTGGAAATTTTCAGCAAATACGATATAATAGTGGATGCAACAGATAATGCTCCCACCCGGTATATGATCAGTGACTGCTGTGTAGTACTAGGAAAGCCCCTTGTATCAGGTGCTGCTGTAGGATTGGAAGGGCAGCTCACTATCTACAATCACAATGGTGGCCCTTGTTATCGATGTCTCTTTCCAACGCCACCACCTAGAACAGCATGCCAAAGTTGTGCCGACGGTGGTGTACTAGGAGTAGTTCCTGGTATAATTGGCTGTCTCCAAGCTCTCGAGGCAATTAAGATTGCAGCTTCTGTTGGTGAACCACTCTCCGGAAGAATGCTTCTCTTTGATGCATTGTCTGCACGGATCCGTATTGTTAAAATCAGAGGAAGGTCAATGCAATGTGAAGCTTGTGGAGAAAATTCAACATTCAATCAGCAATACTTCCGAGAATTTGATTACGAGAAGTTTACTCAGACTCCTTTATGTGTGCCTCCTTTGAAGTTAAATCTACTTCCCAGTGAATCAAGAATCAGCAGCAAGGAATACAACGAAATAATTCTCAACAAGGAACCACATGTGTTGGTTGATGTTAGACCAGCTCACCATTTCAAGATTGTATCACTTCCAAACTCCTTGAACATTCCATTCTCAACTTTAGAGTCTAGGTTGCCGGAAATATCGTCAATTTTGAAGAAAGATGAAGAGGAAAATGGTGCGGTTTCTGAATCAAGTGCACGATTATATGTAGTATGCAGAAGAGGAAATGATTCTCAAAGGGCTGTTCAATACCTTCACAAAATGGGTTTTAATTTTGCTAAGGATATCGTTGGCGGTTTGGAATCTTGGCCTCAAAATGTTGATCCTAACTTCCCTACTTATTAG 1374 0.4134 MSSASEILQQLESLKNEKTKIEHKISHLEAQLKDINLQKQVSASSNGSSPYATNGLEPHMIHRYSRHLVLPSFGVQGQANLLKSSILVVGAGGLGAPALLYFAAAGVGKLGIVDHDKVELNNMHRQIIHTEAYIGQPKVKSAAAACRSVNSSIEIVEHEEALRTSNALEIFSKYDIIVDATDNAPTRYMISDCCVVLGKPLVSGAAVGLEGQLTIYNHNGGPCYRCLFPTPPPRTACQSCADGGVLGVVPGIIGCLQALEAIKIAASVGEPLSGRMLLFDALSARIRIVKIRGRSMQCEACGENSTFNQQYFREFDYEKFTQTPLCVPPLKLNLLPSESRISSKEYNEIILNKEPHVLVDVRPAHHFKIVSLPNSLNIPFSTLESRLPEISSILKKDEEENGAVSESSARLYVVCRRGNDSQRAVQYLHKMGFNFAKDIVGGLESWPQNVDPNFPTY* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0060 457 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 3 434 IPR045886 -
Tpr4g0060 457 Pfam ThiF family 64 299 IPR000594 -
Tpr4g0060 457 SMART rhod_4 342 452 IPR001763 -
Tpr4g0060 457 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 61 424 IPR035985 GO:0008641
Tpr4g0060 457 CDD ThiF_MoeB_HesA_family 63 291 - -
Tpr4g0060 457 CDD RHOD_ThiF 332 457 - -
Tpr4g0060 457 ProSiteProfiles Rhodanese domain profile. 352 455 IPR001763 -
Tpr4g0060 457 Gene3D - 58 308 - -
Tpr4g0060 457 Hamap Adenylyltransferase and sulfurtransferase MOCS3 [MOCS3]. 28 457 IPR028885 GO:0002143|GO:0004792|GO:0005829
Tpr4g0060 457 Gene3D - 339 457 IPR036873 -
Tpr4g0060 457 Pfam Rhodanese-like domain 344 446 IPR001763 -
Tpr4g0060 457 Coils Coil 4 38 - -
Tpr4g0060 457 PANTHER ADENYLYLTRANSFERASE AND SULFURTRANSFERASE MOCS3 3 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0060 Tpr-Chr4 599085 604397 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0060 102 457 Sulfurtransferasese or Rhodanese AT5G55130 72.702 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0060 K11996 - gmx:100814736 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0060 4 599085 604397 Tpr4g0060 4 599085 604397 ECH