Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0036 ATGGAGGAAAGTGTTTTTATTTCTAAAATATTAAATGATTTTAGTGGTGATGATTATTTGATGGTTGAAAAATTACTAAATTTGCGTTCTGAGTCTTTGGCTAAACAATTTAAAGATGATGTTTCTTGTGTTCTTCGTTCCAACAACCTTAAATCTGTGGGTGTTTATTGCAACAATGATTCTGGGTCGAAAACAGCCGAAATCAAGCGATCAAAGGTAAATGATTGTGGTAGTCTTAAGTTTTCTATGCTTGAATCAAAGAATCATGAGGTTGCTGCTTGTAAACCCGATCAGCGTGTTGGGAAAATGATTCTCAAGATAAGAAAAAGTGATTTAATGGCAAGAGTTGATTTTGGAAATGTTGGTACAAAGACCCATGAAGCGGCTTCTGAGAAATGTTTGTCCGGTGAGGGTTTTGAGAAGAAACACAATCATGAGATTGCTTCTTGTAGACCCGATGAGAGTGTTGGGAAAAGGGTTATCAAGATAAGAACAAATGATCGATCAATGGGAGTTGATTTTGACAATGTTGGTACAAAGACTCATGAGGCTGCTGCCGAGAAATGTTTGTCCGGTGAGGGTTCTGAGAAGAAACACTATCATGAGGTTGCTGCTTGTAGACGCGATGAGAGTGTTGGGAAGGGGATTATCAAGATAAGACCAAATGATCGATCGCTGAGAGTTGATTTTGGCAATGTTGGTACAAAGACTCATGAGGCGGCTCCCGAGAAATGTTTGTCCGGTGAGGGTTCTGAGAAGAAACATAATCATGAGGTTGCTGCTTGTAGACGCGATGAAAGTGTTGGGAAAGGGATTATCAAGATAAGAACAGGTGATCATCGATCGCTGAGAGTTGATTTTGGCAATGTTGATATGAAGAATCATGAGGCAGCTGCCGAGGGAACTTCATCAGATGAGGGTTCCAAGAAGGAAATGAAGAAAAGAAAAGCTAAGGATGAAAGATCAAGCAAACCGTCAAAGAAACATAAGAACCTCGGAAACAATGATAATGTTAATGACCAGATAGAAGAAGAGTACCCTGAGCTTCCATTGGCATTTAAAGAAAAGATTGAAGAAATGGAAGGTAGTGAGGTGAAATTGGTGATCCAGAAGGAACTAACTGCGAGTGACGTGGACAAAAGCAAAAGCCGCTTCTCCATTCCCATAAAGAAGATGATTAAAGATTGTAAATTTTTGAGACTAGAAGAGGAATCGTCTTTGGATTATGTGCGTCAAAAGAAAACAGATGGGAAGAAGCTTGATGGTTTTTTAGTGTCTGTGTTGGATCCGAATCTTATACTCCACGATGGTATTTGCTTCAAGAAGTGGAAAATGGCGAAGAATACTGAGATTTACAATCTCACAAAAAAATGGAATGATCTTGTAGCAAAAAACCTTTTCAAAGAAAACGAAAAGGTGCAACTCTGGTCTTTCAGAAGTCATCAAAAGCTCTACTTTGCACTCGTCAAGCTCCAGCCAAGATCGATTAATCAATGA 1497 0.3914 MEESVFISKILNDFSGDDYLMVEKLLNLRSESLAKQFKDDVSCVLRSNNLKSVGVYCNNDSGSKTAEIKRSKVNDCGSLKFSMLESKNHEVAACKPDQRVGKMILKIRKSDLMARVDFGNVGTKTHEAASEKCLSGEGFEKKHNHEIASCRPDESVGKRVIKIRTNDRSMGVDFDNVGTKTHEAAAEKCLSGEGSEKKHYHEVAACRRDESVGKGIIKIRPNDRSLRVDFGNVGTKTHEAAPEKCLSGEGSEKKHNHEVAACRRDESVGKGIIKIRTGDHRSLRVDFGNVDMKNHEAAAEGTSSDEGSKKEMKKRKAKDERSSKPSKKHKNLGNNDNVNDQIEEEYPELPLAFKEKIEEMEGSEVKLVIQKELTASDVDKSKSRFSIPIKKMIKDCKFLRLEEESSLDYVRQKKTDGKKLDGFLVSVLDPNLILHDGICFKKWKMAKNTEIYNLTKKWNDLVAKNLFKENEKVQLWSFRSHQKLYFALVKLQPRSINQ* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0036 498 Pfam B3 domain-containing protein At2g31720-like 356 463 IPR005508 GO:0003677
Tpr4g0036 498 Gene3D - 358 493 IPR015300 -
Tpr4g0036 498 MobiDBLite consensus disorder prediction 295 341 - -
Tpr4g0036 498 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 293 493 IPR005508 GO:0003677
Tpr4g0036 498 MobiDBLite consensus disorder prediction 295 334 - -
Tpr4g0036 498 SUPERFAMILY DNA-binding pseudobarrel domain 368 489 IPR015300 -
Tpr4g0036 498 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED 293 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0036 Tpr-Chr4 378099 379865 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0036 348 488 B3 DNA Binding Superfamily AT1G05930 25.676 2.72e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0036 - - mtr:MTR_5g092880 271.166