Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0030 ATGGAAGGTTTTGTTGTGAGAAGGGTTATTCCTTCTGATAACAGTTGTCTATTTAATGCAGTTGGATATGTTATGGATCGTGATCAAACCAAAGCTGCTGAATTGAGACAGGTTATAGCTGCAACAGTAGCAAGTGATCCCGAGAAATATTCTGAAGCATTTCTTGGGAAGCCAAATCCAGAGTATTGTAACTGGATTCTTGACCCAGAGAAGTGGGGAGGTGCAATTGAACTTTCAATATTAGCAGATTATTATGGACGTGAGATTGCGGCATATGATATTCAGACAACGCGGTGCGATTTGTATGGTCAGGAAGGTAACTATTCTGAAAGGGTGATGCTGATTTATGATGGTCTCCACTACGATGCTTTAGCTATGTCTCCTGTCGAAGAAGCTCCTGAGGATTTTGATCAGACCATATTTGCGATACAAAAAAATAGAAGCATTGGACCTGTCGAGGAGATTGCTCTAAATTTTATTAAAGACCAACATAGGAAACGGAGATTCACCGACACTGCCAACTTCACTCTGCGCTGTGGCGTATGCCAAATTGGAGTTATTGGTCAGAAGGAAGCAGCGGAGCACGCTCAAGCAACCGGTCATGTTAACTTTCAAGAATTTAGATGA 627 0.4179 MEGFVVRRVIPSDNSCLFNAVGYVMDRDQTKAAELRQVIAATVASDPEKYSEAFLGKPNPEYCNWILDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQEGNYSERVMLIYDGLHYDALAMSPVEEAPEDFDQTIFAIQKNRSIGPVEEIALNFIKDQHRKRRFTDTANFTLRCGVCQIGVIGQKEAAEHAQATGHVNFQEFR* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0030 208 PANTHER UBIQUITIN THIOESTERASE OTU1 6 206 - -
Tpr4g0030 208 Pfam OTU-like cysteine protease 12 107 IPR003323 -
Tpr4g0030 208 ProSiteProfiles OTU domain profile. 5 127 IPR003323 -
Tpr4g0030 208 Gene3D - 1 173 - -
Tpr4g0030 208 SUPERFAMILY Cysteine proteinases 7 124 IPR038765 -
Tpr4g0030 208 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 6 206 IPR039138 GO:0004843|GO:0016579|GO:0030433|GO:0101005
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0030 1 208 C2H2 Transcription Factor Family AT1G50670 79.808 2.64e-128 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0030 K13719 - gmx:100499809 384.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0030 4 336047 339770 Tpr4g0030 4 336047 339770 ECH