Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0016 ATGGATTTTATCTCTAGGGCAAGTCTAATGAATGTGTTCTATTTTATTGGTTTTAGAGCATGCCAAAAGATATTGGGAACAAAGGGTTCTACAGTTCCAGTTCCAGTTCCTGTTCCACTTCCAGAAGACAAAGAAGGAGTTTATGTCCGACCTATTTGTGCATACAAGGGCTACAAGGTTCAAGCTACAGTTCGAAGACAGATGCTGTATTTATTTCAGCAGAAGTTGGATGAAGGATTTTGCTACATCTTGTCTTTCTTTACTGTTGCTCCAACACCAAATGAACAAGTGCTGGTTGTGGCATATGAAACTGCAGAATATCAGGGTTCAAATTTGTTCATGGGAAATATTGGTGATTCAAGAGCAATCATGGGATCTAAGGATAGCAATGACTCGATGGTGGCGATTCAGCTGACCGTTGATTTGAAACCTGATTTGCCAAGAGAAGCAGAAAGTATTAAGAAGTGCAAAGGTAGGGTATTTGCATTGGAAGATGAACCAGAAGTTCCTAAGGTGTGGTTACCTTATGATGATGCACCAGGATTAGCAATGGCTAGAGCATTCGGAGATTTTTGCTTGAAGGAGTATGGTGTCATTTCTATACCTGAATTTACGCACCGGCTTCTCACAGACAAAGACCAGTTCATTGTTCTTGCCTCGGACGGGATCTGGGATGTTTTGAGCAATGAAGAGGTGGTGGAGATAGTATCATCAGCACCGAATCGATCATCAGCAGCGAGGGTTATAGTGGAATCTGCCGCACGAGAGTGGAAACATAAATATCCGACTTCAAAAATGGACGACTGTGCTGTTTTGTGCCTATTTTTGGATGGGAAAATCAACTCAGAAGAATCTGATTGTGATGAACAATGCTATTCTTCTGCAACCATCCAGAATAACAACGATTTGAGTAATCCAGTTGAGTTGGACGAAGGTCAAAAGTCCGAGCCATCTTTGCGAAGGAACTACACTGTTAGATCCTCAGAAGAAATTGAGAAATGTGTAGGAGGAGAATCTGTTGATGTTGAAGATGGAACATCAACAGCTGAAGATCAAAACTGGTTAGCTCTAGAAGGTGTCACCCGAGTAAACTCACTGGTACAACTTCCTAGATTTTCTGAAGAAAAGCCTAACTCTTGA 1140 0.4149 MDFISRASLMNVFYFIGFRACQKILGTKGSTVPVPVPVPLPEDKEGVYVRPICAYKGYKVQATVRRQMLYLFQQKLDEGFCYILSFFTVAPTPNEQVLVVAYETAEYQGSNLFMGNIGDSRAIMGSKDSNDSMVAIQLTVDLKPDLPREAESIKKCKGRVFALEDEPEVPKVWLPYDDAPGLAMARAFGDFCLKEYGVISIPEFTHRLLTDKDQFIVLASDGIWDVLSNEEVVEIVSSAPNRSSAARVIVESAAREWKHKYPTSKMDDCAVLCLFLDGKINSEESDCDEQCYSSATIQNNNDLSNPVELDEGQKSEPSLRRNYTVRSSEEIEKCVGGESVDVEDGTSTAEDQNWLALEGVTRVNSLVQLPRFSEEKPNS* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0016 379 CDD PP2Cc 98 276 IPR001932 -
Tpr4g0016 379 PANTHER ALPHABET, ISOFORM E-RELATED 107 367 - -
Tpr4g0016 379 SMART PP2C_4 39 274 IPR001932 -
Tpr4g0016 379 Pfam Protein phosphatase 2C 107 253 IPR001932 -
Tpr4g0016 379 Gene3D - 88 278 IPR036457 -
Tpr4g0016 379 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 107 367 - -
Tpr4g0016 379 ProSiteProfiles PPM-type phosphatase domain profile. 37 276 IPR001932 -
Tpr4g0016 379 SUPERFAMILY PP2C-like 106 278 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0016 Tpr-Chr4 173277 180013 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0016 108 379 PP2C-type Phosphatase Gene Family AT1G03590 70.036 6.96e-130 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0016 - - gmx:100777448 460.299