Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0010 ATGAGTGTAGTAGGGTTTGATATTGGAAATGAGAATTGTGTAATTGCTGCAGTGAAGCAAGGTGGGGTTGATGTTTTGTTGAATGGTGAATCAAACCGTGAAACCCCTGCAATCGTTTGCTTTGGAGAGAAGCAACGGTTTTTTGGGTCTGCTGGGGCTGCTTCTGCAATGATGCACCCGAAATCGACAGTATCTCAAGTCAAGAGACTAATAGGACGGAGATTTGATGACCCTAATGTTCAAAATGACCTAAAAAAGCTCCCTGTTGAAACTTCCGAAGGTCCAGAAGGGGGAATTTTGATCCACTTGGAATACTTAAAGGAGGATCATAAGTTTATGCCAGTTCAAATATTAACAATGCTCTTTGCTCATTTGAAGACTATAGCTGAAAATGATCTGGGGACCTCTGTTTCAGATTGTGTTATCGGAGTTCCATTATACTTCACTGACTTGCAGAGACGAGAATATCTCGATGCGGCAACAATTGTTGGGTTGAATCCTTTGAAGTTGATTCATGATTGCACTGCAATAGGTCTTGGTTATGGTGTTTACAAAACAGATTTTCCTGATGGAGATCCTATTTATGTTGCCTTTATTGACATTGGCCACTGTGATACTCAGGTCGCTATTGCAGAATTTCAAGCCACAAAAATGAAGATTCTTTCACATACTTTCGATAGTAGCTTAGGGGGTAGAGACTTTGATGAGGTTCTATTTAGACATTTCGCAGAAACATTTAAGGAACAGTACGACATTGATGTGTATTCTAACGACAGAGCTTGTAATAGGCTGCTTGCGGCGTGTGAGAAGTTGAAGAAAGTTTTGAGTGCAAATTTAGAGGCACCTCTTAACATCGAGTGTTTGATGGATGAAAAAGATGTTAGTGGATTTATCAAGAGGGAAGAATTCGAGAATTTGGCTTCAGGGTTATTGGAGAGAATTTCTATTCCTTGCAATAGAGCATTGGCTGACGCGGGCTTGAGCGTTGATAAGATTGATTCTGTCGAGTTAGTTGGTTCAGGTTCAAGAATTCCAGCTATAACTAGATTATTAACCTCTCTATTTGAGAAAGAACTCAGCCGAACGCTGAATGCAAGCGAATGTGTAGCTCGCGGTTGTGCTCTTCAATGTGCAATGCTCAATCCTGTTTCCCGTTTCAAAGAATACGAGGTCGAGGATTCGACTCCTTTTTCTATTGGACTTTCCTCGGACGAAGGTCCAATTTGTGAAAAATCAAATGGTATACTTTTCCCAAAAGGTGAACCAATTCCAAGTTCTAAAACTATTACGTTACAGGGCAGTAATTTGCTTCGTTTGGAAGCTTTCTATCCTATTCTACATGAATTACCAATGGGGATATCTCCTAAAATTAGTTCCTACACGATTGGTCCTATACATGAATCCGATGGAAGTAAGGCAGGAGTTGAAGTTATATTTCAACTAAATCTGAACGGCATTGTCAATATCGAATCATCTACAGTAAGTAAGAAGCCTAATTTTAATCTCTCAATATTACATTATCAGTTTTCTAAGATATCTAGTGATGTACATGAACCTTTAATTTATCTTCAGTTGATCGAGGATCATGTGGAAGATTCTGTTACAACGCGTGATAATCATTCAAATTCTGACGCAATGGATGTTGAGCCCATTTCCGAGACAGATCAAAATGTCAATGAACATAGTATCAATCAGAAGAGTGAACCTCCACATAGTTCTTCTGATGGTACAGGAAAAGATAAAGCTAACAGAAGGCTTAATTTACCAGTGAGTGAGACCATCTTCGGTGGAATGACCGGTGCTGAACTCGTGGAAGCACGAGAAAAAGAACGTCAGTTAATCCAGCAGGATGTAGCAATGGAGTTAACCAAAAACAAGAGGAACACTTTGGAGTCATTCGTCTATGACACGAGGAATAAGCTCTTAAACGAATACCGTAATTTTGCAAGTGAACAAGAGAAGGATGAAATATCCAGGAACCTCGAAGAGACTGAGAAATGGCTTTATAATGAAGGAAATGAAGAAACATTACATACTTATTTTGAAAAACTCGAAGATCTAAAACAGCTGGTGGATCCAGTCGACAACCGGTACAAAGACGAAGAAGCAAGAGTGCAATCTACAAGAGAATTATTAGGTAGCATCGTTGAGCATCGCATGTTTTTTCCAGATGAGATTCCACCTGAAACTAAAGAGAAGATCATCGAAGAGTGTAACAAAGCAGAAAAATGGCTAAGAGACAAGAGGCAACATCAAGATGCTTTGCCTAAGTGCGCTGATCCAGTATTTTGGTCAAGGGACATCGATAGCAGGACACGAGAATTAAACTTAGCATGCCAAAAGATATTGGGAACAAAGGGTTCTACAGTTCCTCCAGAAGACAAAGAGTAA 2391 0.3969 MSVVGFDIGNENCVIAAVKQGGVDVLLNGESNRETPAIVCFGEKQRFFGSAGAASAMMHPKSTVSQVKRLIGRRFDDPNVQNDLKKLPVETSEGPEGGILIHLEYLKEDHKFMPVQILTMLFAHLKTIAENDLGTSVSDCVIGVPLYFTDLQRREYLDAATIVGLNPLKLIHDCTAIGLGYGVYKTDFPDGDPIYVAFIDIGHCDTQVAIAEFQATKMKILSHTFDSSLGGRDFDEVLFRHFAETFKEQYDIDVYSNDRACNRLLAACEKLKKVLSANLEAPLNIECLMDEKDVSGFIKREEFENLASGLLERISIPCNRALADAGLSVDKIDSVELVGSGSRIPAITRLLTSLFEKELSRTLNASECVARGCALQCAMLNPVSRFKEYEVEDSTPFSIGLSSDEGPICEKSNGILFPKGEPIPSSKTITLQGSNLLRLEAFYPILHELPMGISPKISSYTIGPIHESDGSKAGVEVIFQLNLNGIVNIESSTVSKKPNFNLSILHYQFSKISSDVHEPLIYLQLIEDHVEDSVTTRDNHSNSDAMDVEPISETDQNVNEHSINQKSEPPHSSSDGTGKDKANRRLNLPVSETIFGGMTGAELVEAREKERQLIQQDVAMELTKNKRNTLESFVYDTRNKLLNEYRNFASEQEKDEISRNLEETEKWLYNEGNEETLHTYFEKLEDLKQLVDPVDNRYKDEEARVQSTRELLGSIVEHRMFFPDEIPPETKEKIIEECNKAEKWLRDKRQHQDALPKCADPVFWSRDIDSRTRELNLACQKILGTKGSTVPPEDKE* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0010 796 PRINTS 70kDa heat shock protein signature 2 15 - -
Tpr4g0010 796 PRINTS 70kDa heat shock protein signature 30 42 - -
Tpr4g0010 796 PRINTS 70kDa heat shock protein signature 140 160 - -
Tpr4g0010 796 PRINTS 70kDa heat shock protein signature 332 348 - -
Tpr4g0010 796 PRINTS 70kDa heat shock protein signature 363 383 - -
Tpr4g0010 796 PRINTS 70kDa heat shock protein signature 388 407 - -
Tpr4g0010 796 PRINTS 70kDa heat shock protein signature 472 488 - -
Tpr4g0010 796 Gene3D - 5 374 - -
Tpr4g0010 796 Gene3D Actin; Chain A, domain 4 230 313 - -
Tpr4g0010 796 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 385 630 IPR029047 -
Tpr4g0010 796 Gene3D - 38 113 - -
Tpr4g0010 796 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 601 697 IPR029048 -
Tpr4g0010 796 CDD HSPA4_like_NDB 2 380 - -
Tpr4g0010 796 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 501 IPR029047 -
Tpr4g0010 796 Gene3D - 186 360 - -
Tpr4g0010 796 Gene3D - 599 709 IPR029048 -
Tpr4g0010 796 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 495 - -
Tpr4g0010 796 PANTHER HEAT SHOCK 70 KDA PROTEIN 525 795 - -
Tpr4g0010 796 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Tpr4g0010 796 MobiDBLite consensus disorder prediction 534 591 - -
Tpr4g0010 796 MobiDBLite consensus disorder prediction 545 572 - -
Tpr4g0010 796 Pfam Hsp70 protein 3 698 IPR013126 GO:0005524|GO:0140662
Tpr4g0010 796 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Tpr4g0010 796 PANTHER HSC70CB, ISOFORM G-RELATED 525 795 - -
Tpr4g0010 796 PANTHER HSC70CB, ISOFORM G-RELATED 1 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0010 Tpr-Chr4 109219 113197 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0010 3 427 Calmodulin-binding Proteins AT3G09440 33.645 4.30e-74 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0010 K09489 - gmx:100795914 1080.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0010 4 109219 113197 Tpr4g0010 4 109219 113197 ECH
Tpr3g4177 3 46468212 46476349 Tpr4g0010 4 109219 113197 PCT