Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0007 ATGGACAATTTGCCTTCTCAATCGCTCTCAATGACGAACGGTGTATCGTTTGTAGCTCCTCTCTGTGTTTCTGCCCAATCTAGCTCCACTATCGATTGGACGGCGTACATGGAACGCCTTGTTATTGAACTCAGCAATCCCAATCTCAGAGAAAATGCTATTTGTGTGCTCTCCAAGCGGAAAGAGTTATTTCATGAACTTGCACCTTTATTGTGGAATTCTTTTGGTACTATCGCAGTACTTTTGCAGGAAATAATTTCAATATATCGTAATCTTTCACCACCAACTCTTTCTCCCGCTCAATCAATTCGAGTGTGCAATGTTCTTGCACTACTTCAGTGTCTCGCATCTCACCCTAATACAAGAATGTCACTCATCACTGCTTGCATACCTCACTATGTGTACCCTTTCCTTGAAATGATAAATACCTTACCACAGTTTCACTATTTGAGGGTTGCGAGTCTCGGAGTCATTGGTGCCTTGGTGAAGGATAGTAGCAAAGAAGTTATACTTTTTCTTCTTTCAACTGAGATCATTCCATTATGCTTGCGCAGCATGGAAATTGGCAACGAATTGTCAAAAAATGTTGCGACTTTCATTCTTCAAAAGATTTTGCTGGATGATGATGGTTTAGCTTATGTTTGTGCTACAACAGACCGTTTTCTTGCCGTACGTCGAATTCTAGACATGGTGTTGGAAAGTCATGAGAGACAACCTTCAACTCAGCTTTTGAAGCTTATAATTCCATGTTATTCTCGTTTGTCTCAAAATCGCAGGGCTGGAATTGCATTAACAAGCTCTCTTCCGGGTGTGTTTACAAACCCGGCTTTCATTAATTCCCTTCGTGAAGATCCAACTACTTGGAGGTGGATGGAGCAATTGTATGAAAATATTAGGATCAACAATTGCAAATGA 915 0.4077 MDNLPSQSLSMTNGVSFVAPLCVSAQSSSTIDWTAYMERLVIELSNPNLRENAICVLSKRKELFHELAPLLWNSFGTIAVLLQEIISIYRNLSPPTLSPAQSIRVCNVLALLQCLASHPNTRMSLITACIPHYVYPFLEMINTLPQFHYLRVASLGVIGALVKDSSKEVILFLLSTEIIPLCLRSMEIGNELSKNVATFILQKILLDDDGLAYVCATTDRFLAVRRILDMVLESHERQPSTQLLKLIIPCYSRLSQNRRAGIALTSSLPGVFTNPAFINSLREDPTTWRWMEQLYENIRINNCK* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0007 304 Gene3D - 32 300 IPR011989 -
Tpr4g0007 304 PANTHER UNCHARACTERIZED 33 299 - -
Tpr4g0007 304 SUPERFAMILY ARM repeat 44 206 IPR016024 -
Tpr4g0007 304 Pfam Cell differentiation family, Rcd1-like 40 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0007 Tpr-Chr4 81989 86579 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Tpr4g0007 Rcd1 1.8e-99 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0007 K12606 - cit:102618037 331.257