Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4990 ATGAGACCAAGGATTCCTATGTTTGATGCAAAACAGAATTTGACTAGCGCTGGTGAATTTGATAGTGATGCTAGAATTTTGATGAATGGTTTAATACAAATGGGATCACAGACAGATTTAATGTTTGGAACACATATGTTTAACATAAATGGTACTCAAAGTAGGTATGGTTGGGTGCAATGCAGCAGAGATATTACTAATGAGGAATGCAGAACTTGTTTGAGTAACTTGCTTGAGGATGTTGAAAATTGTTGTATGCAGAAGAAAGTGTGGAGAATATTTTCTCCAAGTTGTATTATGATGTATGAAACTCAACCATTCTTTGTGAATGGTACAATTTCTGAGCCAGCCAAAGAAAAGGATGACTCAAGGTCATGGATTATCATAGTCATTGTTGTAATTGGAATAGCAGTCGCAGCCCTATTGGCTTTCAGCGCATACTATTTCCGGTGCTTGAAACGTAAAAAAGAGAGAAATTCTATGCAAATCCTTAGTCCAATGTTTTCTCAAGATCAGACTGACATTGAGGAGACTAGACATACTGACCTACCTATGATGCCTCTGAGTACCATTCTAAAGAGTACTAATAATTTTTCTGATGAATATAAATTGGGGAAAGGTGGATTTGGAACTGTGTACAAGGGTGTTTTAGCAGATGGAAGGGAAATTGCTGTGAAAAGGCTTTCAAAAACTTCCGTTCAAGGTGTGGAGGAATTAAAAAATGAATTAATATTGATTGCCAAATTGCAACATCGAAACCTCGTGAGACTATTGGCTTGCTGCATTGAGCAAAATGAAAAGCTTCTTATCTATGAATACTTGCCTAATTCAAGCCTTGATTTTCCCTACTATTTTTTTTTTGTTTTTTGTTTAGAAGCTAAACCTCTTACTTGA 894 0.3602 MRPRIPMFDAKQNLTSAGEFDSDARILMNGLIQMGSQTDLMFGTHMFNINGTQSRYGWVQCSRDITNEECRTCLSNLLEDVENCCMQKKVWRIFSPSCIMMYETQPFFVNGTISEPAKEKDDSRSWIIIVIVVIGIAVAALLAFSAYYFRCLKRKKERNSMQILSPMFSQDQTDIEETRHTDLPMMPLSTILKSTNNFSDEYKLGKGGFGTVYKGVLADGREIAVKRLSKTSVQGVEELKNELILIAKLQHRNLVRLLACCIEQNEKLLIYEYLPNSSLDFPYYFFFVFCLEAKPLT* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4990 297 PANTHER PROTEIN KINASE DOMAIN 13 282 - -
Tpr3g4990 297 Gene3D Phosphorylase Kinase; domain 1 158 273 - -
Tpr3g4990 297 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 13 282 - -
Tpr3g4990 297 Pfam Salt stress response/antifungal 12 104 IPR002902 -
Tpr3g4990 297 Pfam Protein kinase domain 199 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4990 297 SUPERFAMILY Protein kinase-like (PK-like) 176 282 IPR011009 -
Tpr3g4990 297 ProSiteProfiles Protein kinase domain profile. 198 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4990 297 ProSiteProfiles Gnk2-homologous domain profile. 2 107 IPR002902 -
Tpr3g4990 297 ProSitePatterns Protein kinases ATP-binding region signature. 204 226 IPR017441 GO:0005524
Tpr3g4990 297 Gene3D - 6 107 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4990 Tpr-Chr3 54331262 54333283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4990 1 287 Receptor kinase-like Gene Family AT4G05200 33.657 1.60e-47 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr3g4990 Stress-antifung 8.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4990 - - gmx:100798691 444.121