Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4989 ATGTCTCCAGAGTATGCTATGGAGGTGTTATATTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTCTTTTATTAGAGATAATTTGTGGACAAAGAAATAATGGATTCTATCTTGGAGAACACGGTCAAAGTCTTCTTATATATAGTTGGAATCTTTGGCATGAAGGAAAAAGTTTGGAACTGTTAGATCCAACATTGGAAAAGACATACATAGCCAATGAAGTTGTAAGGTGCATACACATTGGTTTGTTGTGCGTACAAGAAGATGCAATTGATAGACCAACCATGTCCAGTGTTGTTGTCATGCTTGCAAGTGATACAATGGCACTTCCCAATCCTAATCATCCTGCATTTTCAGTTGGAAGAAAAGTAAGGGAAGATGAATCAACTTCAAAAACTTCCAATGATCCTTCTGTTAATGAAGTTACAGTATCAAATGTTTTCCCTAGGTAG 453 0.3642 MSPEYAMEVLYSVKSDVFSFGVLLLEIICGQRNNGFYLGEHGQSLLIYSWNLWHEGKSLELLDPTLEKTYIANEVVRCIHIGLLCVQEDAIDRPTMSSVVVMLASDTMALPNPNHPAFSVGRKVREDESTSKTSNDPSVNEVTVSNVFPR* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4989 150 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 147 - -
Tpr3g4989 150 PANTHER PROTEIN KINASE DOMAIN 1 147 - -
Tpr3g4989 150 MobiDBLite consensus disorder prediction 117 140 - -
Tpr3g4989 150 SUPERFAMILY Protein kinase-like (PK-like) 1 129 IPR011009 -
Tpr3g4989 150 Pfam Protein tyrosine and serine/threonine kinase 1 101 IPR001245 GO:0004672|GO:0006468
Tpr3g4989 150 Pfam Domain of unknown function (DUF3403) 105 150 IPR021820 GO:0004674
Tpr3g4989 150 Gene3D Transferase(Phosphotransferase) domain 1 1 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4989 Tpr-Chr3 54328613 54329249 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4989 1 150 Receptor kinase-like Gene Family AT4G23150 48.387 2.47e-46 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr3g4989 PK_Tyr_Ser-Thr 2e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4989 - - adu:107471995 243.432