LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr3g4981	ATGGAAATTTCAAATAGTTCACAAAACATGAGAAATTATTCTCAAGAACACGCATCATTACCCCCTAAAATCAGTAAATATGAAATAAGTGAATCATGTTTAGAAGGATTGATGTCACAATTAGGCAAAGAGTGCGGACCAAGGCGATATCATCGAACATATTCGGATAGCATGCTAGCATCTGAGCAGCAGCACCAGCAACAGCAGCAGCAGCAGCAGCAGGAAGTACCTTATTGGTTGAAAGATCTCCTTGATGACGATGATGATGATAACGATGAGCCTGAAGAATCAGAAGAGAAGCTGCAGCCTAGTACTAATAATGCATGCAGCAACAGCAGCAAGGCTCATAGAAGATCATCAAGTGACTCCTTGGCATACTTAAATAATAAAACTATTCTTCAATATTCTCCAGAAAGGAAGGAACAAAATAATATGTATCTTCTAGCTGCAGACCAACAACCCTCCTTTCTGCACCAAAATCATCCTAGAACCGATCATTCAAAACGCGGTAAAAGGCATTCAGCTCAACAATATCGAGCGAGGAAAGTTCAATACATTGGAGAACTAGAAAGAAGTATCCAGGCTTTACAGGCAGAAGGATATGAAGTTTCAGCAGAGCTTGAATTTCTTGATCAGCAAAACCTCATATTAGGTATGGAGAATAGGGCCCTCAAACAACGGTTGGACAGTTTATCCCAGGAGCACTTCGTCAAATGTTTGGAGCAGGAAGTGCTTGAGAGAGAAATCACAAGACTTAGAAATTTGTATCAACAACAACAACACAAACAACAGCAGCAGCAGCAGCAGCAACAACAAAAGCATCATGGTAGGAATCGATCTAAACAACGTCAAGATCTTGAGTCATCAATTGCCAAACTTTCTTTGAAAAATAAGGGAACCGAATCATCGCAGAAAGCCAGATAG	924	0.4037	MEISNSSQNMRNYSQEHASLPPKISKYEISESCLEGLMSQLGKECGPRRYHRTYSDSMLASEQQHQQQQQQQQQEVPYWLKDLLDDDDDDNDEPEESEEKLQPSTNNACSNSSKAHRRSSSDSLAYLNNKTILQYSPERKEQNNMYLLAADQQPSFLHQNHPRTDHSKRGKRHSAQQYRARKVQYIGELERSIQALQAEGYEVSAELEFLDQQNLILGMENRALKQRLDSLSQEHFVKCLEQEVLEREITRLRNLYQQQQHKQQQQQQQQQQKHHGRNRSKQRQDLESSIAKLSLKNKGTESSQKAR*	308

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr3g4981	307	Coils	Coil	242	272	-	-
	Tpr3g4981	307	SUPERFAMILY	Leucine zipper domain	171	222	IPR046347	GO:0003700\|GO:0006355
	Tpr3g4981	307	MobiDBLite	consensus disorder prediction	88	122	-	-
	Tpr3g4981	307	SMART	brlzneu	162	223	IPR004827	GO:0003700\|GO:0006355
	Tpr3g4981	307	MobiDBLite	consensus disorder prediction	256	273	-	-
	Tpr3g4981	307	PANTHER	-	52	156	-	-
	Tpr3g4981	307	PANTHER	-	159	298	-	-
	Tpr3g4981	307	MobiDBLite	consensus disorder prediction	1	24	-	-
	Tpr3g4981	307	MobiDBLite	consensus disorder prediction	1	19	-	-
	Tpr3g4981	307	MobiDBLite	consensus disorder prediction	256	307	-	-
	Tpr3g4981	307	PANTHER	BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED	52	156	IPR044797	-
	Tpr3g4981	307	PANTHER	BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED	159	298	IPR044797	-
	Tpr3g4981	307	MobiDBLite	consensus disorder prediction	287	307	-	-
	Tpr3g4981	307	MobiDBLite	consensus disorder prediction	56	74	-	-
	Tpr3g4981	307	MobiDBLite	consensus disorder prediction	101	122	-	-
	Tpr3g4981	307	MobiDBLite	consensus disorder prediction	44	74	-	-
	Tpr3g4981	307	Gene3D	-	159	237	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr3g4981	Tpr-Chr3	54243981	54246608	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr3g4981	170	238	bZIP Transcription Factor Family	AT2G42380	52.174	1.60e-15	73.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr3g4981	-		-	mtr:MTR_3g005230	297.745