Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4962 ATGGATTCAAGGAGGATGGAAGAAGAAGAAGAAGGTCCACCATCAAACGATTTATGTTCAATATGTCATGGAAACTTCCAGAATCCATGTCAAGCTAACTGTTCTCATTGGTTTTGTGCTAATTGTATTATGCTTCTTTGGCGACACTCTTCCGGCATTCAACCTTGTAAATGTCCTCTATGTCGCCGACCCATCAACCTTCTTGTTCCAACCAACAACAACAGCAGCAACAGCGATGACGATCCTCAAACTATGTCTGATCTTCAAACCTATAACCGTATGTTTGGTCAACAATCTAATGCTCCTATTACTCAGAGAATCCGTGATCTTCCATTTCTTTTGAGGAGACTTTTTAGGGATTTTGTTAATCCTAATACATCTCTTCCTCTTGTTATCAGAGCTCGTGTCTTCATTACTATGATACTGAGTGTTATATACATCTTAAGCCCTATTGACATTATTCCAGAAGCGATATTGGGAATAATTGGTCTGTTGGATGATGTCCTAATTGCACTAATCTTCTTCCTACATGTTGCTGCCCTTTATAGATCAGTACTTTACATCCGCCATGGGGGTTCATGA 582 0.3969 MDSRRMEEEEEGPPSNDLCSICHGNFQNPCQANCSHWFCANCIMLLWRHSSGIQPCKCPLCRRPINLLVPTNNNSSNSDDDPQTMSDLQTYNRMFGQQSNAPITQRIRDLPFLLRRLFRDFVNPNTSLPLVIRARVFITMILSVIYILSPIDIIPEAILGIIGLLDDVLIALIFFLHVAALYRSVLYIRHGGS* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4962 193 Pfam Protein of unknown function (DUF1232) 139 172 IPR010652 -
Tpr3g4962 193 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 105 IPR013083 -
Tpr3g4962 193 ProSitePatterns Zinc finger RING-type signature. 34 43 IPR017907 -
Tpr3g4962 193 PANTHER BNAC07G13660D PROTEIN 14 193 - -
Tpr3g4962 193 SMART ring_2 19 61 IPR001841 -
Tpr3g4962 193 ProSiteProfiles Zinc finger RING-type profile. 19 62 IPR001841 -
Tpr3g4962 193 Pfam Zinc finger, C3HC4 type (RING finger) 16 66 - -
Tpr3g4962 193 PANTHER UNCHARACTERIZED 14 193 IPR038896 GO:0061630
Tpr3g4962 193 SUPERFAMILY RING/U-box 13 72 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4962 44 193 C3H Transcription Factor Family AT1G72175 63.158 2.18e-54 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4962 K15707 - pvy:116125921 243.047