Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4950 ATGGAATCTCGATTGGTTGATGGAAGTGACCGGACAGAAGTTTCTGGGGATGCTGATTTCGTGGAACCAAATGATGGGTGTAGATTGCAAGAGAATTATTCTGGGAGAGAATTGGGTAGCTCTCATCATGATCATGCTATTCAGGAACCATATGAAGGCATGGAATTTGCATCTGAAGATGCGGCTAAGATATTTTATGATGAATACGCCCGACATGTTGGATTTGTCATGCGTGTGATGTCTTGTCGACGGTCAGAAAGAGATGGTAGGATTCTTGCTCGCAGGCTTGGGTGTAATAAGGAAGGTCATTGTGTCAGCATACGAGGGAAACTTGGGCCAGTTCGGAAAACAAGGGCAAGCTCAAGGGAAGGTTGTAAGGCGATGATTCATATCAAGTATGACAAATCTGAAAAATGGGTGATAACAAAGTTTGTGAAAGATCATAATCATCCACTAGTAGTCTCTCCACGTGAAGCACGGCAAACAATGGATGAGAAGGATAAGAAAATTCAGGACCTAACAGCAGATCTTCGGATTAAGAAACGGTTGTGTGTAACTTATCAAGAACAGTTAACTTCGTTTATGAAAATTGTCGAAGAGCACAGTGACAAGCTGTCTGCAAGAATTCATCACATACTTGATAATCTTAAAGAATATGAATCCATAGAAGAGCTTTTGCACCAGACGTAG 690 0.4159 MESRLVDGSDRTEVSGDADFVEPNDGCRLQENYSGRELGSSHHDHAIQEPYEGMEFASEDAAKIFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGHCVSIRGKLGPVRKTRASSREGCKAMIHIKYDKSEKWVITKFVKDHNHPLVVSPREARQTMDEKDKKIQDLTADLRIKKRLCVTYQEQLTSFMKIVEEHSDKLSARIHHILDNLKEYESIEELLHQT* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4950 229 Pfam FAR1 DNA-binding domain 65 153 IPR004330 -
Tpr3g4950 229 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 23 228 - -
Tpr3g4950 229 MobiDBLite consensus disorder prediction 1 18 - -
Tpr3g4950 229 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 23 228 - -
Tpr3g4950 229 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4950 Tpr-Chr3 54011642 54014887 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr3g4950 FAR1 4.3e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4950 - - pvu:PHAVU_005G002900g 376.326