Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4941 ATGGCGGAGGTAATTAACTTACCTCCTGAATCTCACGACCGATCTCCCACCACTGCTGCTCCTCATCCTCCTCCTCCTCCCTCCGACGACGATCTCCCACCTCCACCTAATCCATCTAATCCTCGTCGGAGAGATTTCGACCGTCGTGACGACAGAGATTTCGACCGCCGTCCTCACCGTGGTGGCAGAGGTGGCCGAGGTGGTTACTACAACCGTGATAGAGACTTCAAGCGCCGTCGTAGTCCTAGCCCTAATTATCGTGACCGCCGCTATTCTCCTCCTCATCCGCAATCTAGAAGGTCACCTCCGCCTTATAAGAGATCCAGAAGGGGTAGTCCCCATGGACCCAATGACAGATTTGGCCATGATCACTTTGGTGGCTATGAACGCGGAGTGGGCGGAAGGGGTGGTTATGCAGATGATAGATCTGGTGGTAGGTTTCCACATCGATCTGCAGGGGGATATCAAAATGGAATTTCTGATCTGGATGCTAATCGCGGTTATGCAGATTTGCCAAGTGGAGGTGCTCGAAGAGAGGGGTTGATGTCCTATAAGCAATTCATTCAGGAGCTTGAAGATGACATACTGCCATCTGAAGCTGAGCGTAGATACCAAGAGTACAAATCAGAGTATGTTACTACCCAAAAGCGTGCTTATTTTAATGCTCACAAAGATGAGGCGTGGTTGAAAGATAAATATCATCCAACAAATTTACTGACAGTAATTGAAAGGAGGAATGAAAATGCTCGACGCCTGGCGAAGGATTTTTTGCTTGATTTGCAAAGCGGAACACTAGACATAAATCCGAGTTTAAACTCTGCATCCGCTAGACCAGAGCAAGCCAGCGAGCCAAATTCAGAGGAGGAAACAGATGTCGGTGATAAACGAAGAAGATATGGTAGGGGATCTAACAAGGATAACGACTTCTCTGCTGCTCCAAAGGCTCACCCTGTCAGCTGTGAACCTAGAAGGATACAGGCAGATGTTCAACAGGTTCAGGCTGTTGTTCGTAAGCTTGACAAGGAAAAAGGGATTGAAGATAATATTTTAAGCACCAGTGATCATAGTAAAAATAGTGATAAGTCTCACAGTGGATCTGTGGGGCCAGTAATTATAATCCGTGGCCTAACATCTATTAAAGGCTTAGAGGGTGTTGAGCTACTAGACACACTTATAACATATCTTTGGCGGATTCATGGTGTAGATTATTATGGAATGCTTGAGATTAACGATGCCAAGGGTTTTAGGCATGTAAGACCAGAAGGCTCAAGGCATGAAGAAACAGGTAAATCAGGGTCAGAATGGGAGAAGAAACTTGATTCATTTTGGCAGAGAAGGTTGGACGGCCAGGATCCCTTGGAAGTAAGGACTGCAAAGGAGAAGATAGATGCTGCAGCAGCTGACATGCTTGATCCATATGTTAGAAAAATTAGGGATGAAAAGTATGGATGGAAGTATGGCTGTGGAGCCAAGGGTTGCACAAAGCTTTTTCATGCGGTTGAGTTTGTTTACAAACATCTCAAGCTTAAACACCCTGAGCTTGTGTTGGAACTTACATCAAAATTGCGTGAAGATCTTTATTTTCAAAATTACATGAATGATCCTGATGCTCCTGGTGGAACACCTGTCATGCAGCAAACTCAGAAGGACAAGCCTTTAAAGCGAAGATTACTGGATGGCCGATTGAAAGATGATCGTGGGAATCGGCGAGACCAGGATAGGAGCGACGGGACAAATGGAGATAGGCCTGACGGTTCTCCATCCCGTGAAAGGCAGTTGGGAAACCGTGATGACACAATGTTTGATGCATATGGAGGGTCTGCTGTACCAACATTCACCTCTGATATGCCCCCTCCTCCTTCAGTTTTGATGCCTGTACCTGGTGCTGGGCCTTTGGGACCGTTTGTTCCTGCTCCACCAGAAGTTGCGATGCAGATGTTTAGGGACCAAGGACCTTCATTTGATCCATCAGGAATGACAATACGTTCTGGTCCTCACATAGGTGGACAGGCCTCTATGATTGCTGTTCCTTCGGCCTTTAGACCTGATCCTCGACGTATGCGGAGTTATCAAGATTTGGATGCCCCCGAAGAAGAAGTTACTGTCATTGACTATCGGAGCTTGTAA 2127 0.4659 MAEVINLPPESHDRSPTTAAPHPPPPPSDDDLPPPPNPSNPRRRDFDRRDDRDFDRRPHRGGRGGRGGYYNRDRDFKRRRSPSPNYRDRRYSPPHPQSRRSPPPYKRSRRGSPHGPNDRFGHDHFGGYERGVGGRGGYADDRSGGRFPHRSAGGYQNGISDLDANRGYADLPSGGARREGLMSYKQFIQELEDDILPSEAERRYQEYKSEYVTTQKRAYFNAHKDEAWLKDKYHPTNLLTVIERRNENARRLAKDFLLDLQSGTLDINPSLNSASARPEQASEPNSEEETDVGDKRRRYGRGSNKDNDFSAAPKAHPVSCEPRRIQADVQQVQAVVRKLDKEKGIEDNILSTSDHSKNSDKSHSGSVGPVIIIRGLTSIKGLEGVELLDTLITYLWRIHGVDYYGMLEINDAKGFRHVRPEGSRHEETGKSGSEWEKKLDSFWQRRLDGQDPLEVRTAKEKIDAAAADMLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAVEFVYKHLKLKHPELVLELTSKLREDLYFQNYMNDPDAPGGTPVMQQTQKDKPLKRRLLDGRLKDDRGNRRDQDRSDGTNGDRPDGSPSRERQLGNRDDTMFDAYGGSAVPTFTSDMPPPPSVLMPVPGAGPLGPFVPAPPEVAMQMFRDQGPSFDPSGMTIRSGPHIGGQASMIAVPSAFRPDPRRMRSYQDLDAPEEEVTVIDYRSL* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4941 708 MobiDBLite consensus disorder prediction 18 40 - -
Tpr3g4941 708 MobiDBLite consensus disorder prediction 111 129 - -
Tpr3g4941 708 MobiDBLite consensus disorder prediction 1 143 - -
Tpr3g4941 708 MobiDBLite consensus disorder prediction 534 597 - -
Tpr3g4941 708 ProSitePatterns Zinc finger C2H2 type domain signature. 488 511 IPR013087 -
Tpr3g4941 708 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 1 708 - -
Tpr3g4941 708 MobiDBLite consensus disorder prediction 271 319 - -
Tpr3g4941 708 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 708 IPR039727 GO:0006397
Tpr3g4941 708 MobiDBLite consensus disorder prediction 41 86 - -
Tpr3g4941 708 MobiDBLite consensus disorder prediction 549 597 - -
Tpr3g4941 708 Pfam SERRATE/Ars2, N-terminal domain 185 266 IPR021933 -
Tpr3g4941 708 Pfam Arsenite-resistance protein 2 427 608 IPR007042 -
Tpr3g4941 708 MobiDBLite consensus disorder prediction 282 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4941 Tpr-Chr3 53949619 53958125 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4941 86 708 C2H2 Transcription Factor Family AT2G27100 61.325 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4941 - - gmx:100811300 1025