Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4926 ATGAATATCATTTTTAGTAGTATAATTCTCACAACCTTACTGACGAGACATATATATATATATATAAACACATACGAGTACAAGGTTTGCATTGCATGCATCCAATTCAAACATTCTAAAATTACCAATATGCTTCCTATTATAGAGCTTGTTATTACTTCCAATCTAATATTATTATTGTTCTTCTTCTCTCAATTATCCACCGCAATCGATACAATCACCCAATTTCAATCTCTTAACGATGATGGCACCACTTTGGTTTCTAATGATGGAACTTTTGAGTTAGGCTTCTTTAGACCAGGTAGTTCCACAAATGGTTATGTGGGAATATGGTACAAAAACATCCCAAAAAGAAGAATAGTTTGGGTTGCAAACCGTGATAATCCAATCAAAGGCAACAATTCCAACTCAACCATGTTGGTTATAAGCAAAGAGGGAAACCTTGTACTACTTACCAACAACAATCAAACTCTTGTTTGGTCAACAAACATCACAACACAATTATTGTCTAATACAAGTTCTCATGTGGCTCAACTATTAGACAATGGAAACTTTGTAATCAAAGACAAATACAATAGTGATCAACAAAGCAAAAATTTCATATGGCAAGGTTTTGACTTTCCTTGTGATACTATGATGCCAGAAATGAAGCTCGGATGGGACCTAAAAACCGGTCTCAATCGTCAATTAACCTCTTGGAAAAATTGGGATGATCCGTCTTCAGGAGATTTAACTTGGGGTATTGTTCTTAGTAGTAATCCAGAAACTGTATTGAAAAAAGGATCAATTGAAATTTATAGAAGTGGTCCTTGGAATGGAGTTGATTTTAGTGGATATCCAGCACTCACTGTTACCCAAATTGTTGATAAAAAAGTTGTAAACAATTCGAATGAAGTTTATTACAAATACAGTCTTGTGAACAAGAGTACGATTTCAATATTGTATTTGAACCAAACACTTTTTCGTCGTCAACGCCTTACATGGATTCTAGAAGAAAATACTTGGAGGGTTTATGATTCTGTGCCAAGAGATGATTGTGATTACTATAATCCTTGTGGACCTTATGGAAATTGTATTCCTAACAACTCTCCAATTTGTCAATGTTTAGATGGGTTTGAGCCTAAATCGTTGGAAAGTTGGAATTCATATAATTGGACACAAGGATGTGTGCGGAAAGGCAAAGAAACTTCAAGTTGTGGGGTGAATGATGGTTTTGGAAGATTTTCTGGATTGAAATTGCCGGCAACAACACATACTTGGGTTGATGCAAATATGACACTTGAGAATTGTAAGAACAAATGCTTTGAAAATTGTTCTTGCACAGCTTATTCAAACTTGGATGTGAGAGGAGATGGTAGTGGTTGTTCTATATGGTTTGGTGATCTTATCGGTTTGAAACAAGTTTCATCGGTCCAACAAGATCTATATGTTCGAATGGATGCTTCAAACGTAGACTCAAATGGAGATATTTCTGGTTGGCATGATAAGAAAAGTCATACTTTGGCAATTGCAATCACTATTCCGTTGATCATTGTTTTGCTGCTCATGCTCATAGTCTTCTACGTTCACAAGAGAAAAACAAAGCAAAGAGCCAAAAATGAAGATGAAGATGGACGATATTTGGAGCTTCCTTTCTTCAAGCTTTCTACAATAATTGATGCCACCAATGACTTCTCAAATGATAACAAGCTTGGAGAAGGTGGTTTTGGGCCGGTATATAAGGGTATACTAGCCCCAGAGAGACAAGTTATTGCCGTCAAAAGACTTTCAGGAAGTTCAAAACAAGGAACAAAAGAATTTAAAAATGAAGTTATATTATGTGCAAAGCTTCAACATCGAAATCTTGTCAAGGTTCTTGGTTGTTGTATTCAAGGAAAAGAGAGAATGCTTATCTATGAATATATGCCCAACAAAAGCTTAGATTCATTTCTTTTTGATTCTGCTCAAAAGAAACTTTTAGATTGGTCCACGCGCTTTAATATCATATGTGGAATTGCTCGTGGACTTCTTTATCTTCATCAAGATTCTAGATTGAGGATTATACACAGAGATCTAAAACCAAGTAATATTTTGTTAGACAGTGATATGAATCCGAAAATTTCAGATTTTGGCTTGGCAAAAATTTGTGGGGATGAACAAGTTGAAGGGAATACAAACAAAGTAGTCGGGACACATGGTTATATGGCTCCTGAGTATGCCATTGACGGAGTATTCTCTATAAAATCAGATGTATTTAGTTTTGGAATATTATTGCTAGAGATTGTGAGTGGAAGGAAAAATAAAGGAATTAGCTATCCAAGAAACAATGACAATCTTGTTGGAAATGCTTGGAGATTGTGGAAAGAAGGTAACTCAAAAGAATTGGTTGATGATTGTTTCGGGGAATCTTATATTGTATCCGAAGCTTTACGTTGCATACAAGTTGGTCTTTTATGTCTACAACAACATCCAAGTGATAGACCTAATATGGTATCGGTGCTTGCTATGTTGACGAATGAAACCAATTTAACTCAACCAAAGGAACCAGGTTTCATAATAAAAAGGGTAATCAAAGAAGGAGAATCTACATTAGAAAATGTAATGTCTTCCTCAATCAATGAAGTCACTATTTCGTTGGATGCTAGAGTTTGCATTGCATGCATCCAATTCAAACATTCTAAAATTACCAATATGCTTCTTATTATAGAGCTTGTTATTACTTCCAATCTAATATTATTGTTCTTCTTCTCTCAATTATCCACCGCAATTGATACAATCACCCAATTTCAATCTCTTAACGATGATGGCACCACTTTGGTTTCTAATGATGGAACTTTTGAGTTAGGCTTCTTTAGACCAGGTAGTTCCACAAATCGCTATGTTGGATTATGGTACAAAAACATCCCAAATAGAAGAATAGTTTGGGTTGCAAACCGTGATAATCCAATCAAAGACAACAAGTCCAACTCAACCATGTTGGTTATAAGCAAAGAGGGAAACCTTGTGCTACTTACCAACAACAATCAAACTCTTGTTTGGTCAACAAACATCACAACACAATTATTGTCTAATACAAGTTCTCATGTGGCTCAACTATTAGACAATGGAAACTTTGTAATCAAAGACAAATACAATAGTGATCAACAAAGCAAAAATTTCATATGGCAAGGTTTTGACTTTCCTTGTGATACTATGATGCCAGAAATGAAGCTAGGATGGGACCTAAAAACCGGTCTCAATCGTCAATTAACCTCTTGGAAAAATTGGGATGATCCGTCTTCAGGAGATTTAACTTGGGGTATTGTTCTTAGTAGTAATCCAGACACTGTATTGAAAAAAGGATCAATTGAAATTTATAGAAGTGGTCCTTGGAATGGAGTTTATTTTAGTGGATATCCAGCACTCACTGTTACCGAAATTGTTGATAAAAAATTTGTAAACAATTCGAATGAAGTTTATTACAAATATAGTCTTGTGAACAAGAGTACGATTTCAATATTGTATTTGAACCAAACACTTTTTCGTCGTCAACGCCTTACATGGATTCCAGAAGAAAATACTTGGAGGGTTTATGATTCTGTGCCAAGAGATGATTGTGATTACTATAATCCTTGTGGACCTTATGGAAATTGTATTCCTAACAACTCTCCAATTTGTCAATGTTTAGATGGGTTTGAGCCTAAATCGTTGGAAAGTTGGAATTCATATAATTGGACACAAGGATGTGTGCGCAAAGGCAAAGAAACTTCAAGTTGTGGGGTGAATGATGGTTTTGGAAGATTTTCTGGATTGAAATTGCCGGCAACAACACATACTTGGGTTGATGCAAATATGACACTTGAGAATTGTAAGAACAAATGCTTTGAAAATTGTTCTTGCACAGCTTATTCAAACTTGGATGTGAGAGGAGATGGTAGTGGTTGTTCTATATGGTTTGGTGATCTTATCGATTTGAAACAAGTTTCATCGGTCCAACAAGATCTATATGTTCGAATGGATGCTTCAAACATAGATTCAAATGGAGATATTTCTGGTGGGCATAAGACAAGTCATACTTTGACAAATGCAATTACTCTTCCATTGGTCTTTGTTTTGCTACTCACGATCATAGTCTTCTACATTTGCAAAAAAAGAAAGCAAAGAGATAAATCAAAAGACATCACTTTAGCCGAAGCGGAAGATGAGGATCTACAAGATTTTGACCTACCATTCTTCAATTTTTCTACGATGATTAGTGCCACAAAAAACTTCTCAAATAATAACAAACTTGGAGAAGGTGGGTTTGGACCAGTATATAAGGGTACCCTTACTACAAATGGGCAAGAAATTGCCATCAAAAGGCTTTCAGGATGTTCAAGACAAGGATCAAAAGAATTTAAAAATGAAGTTATATTATGTGCAAAACTTCAACACCGAAATCTAGTTAAGGTTCTTGGTTGTTGCATTCAAGGAGAAGAGAGAATGCTTGTCTATGAATATATGCCCAATAAAAGTTTAGATTCATTTCTTTTTGATCCAGCCCAAAAGAAACTTCTAGATTGGAGCACGCGTTTCAACATCATATGCGGAGTTGCTCGTGGACTTATTTATCTTCATCAAGATTCTAGATTGAGGATCATACATAGAGATCTAAAACCAAGTAATATTTTATTAGACAATAATATGAATCCAAAAATATCGGATTTTGGCTTGGCAAAAATTTGTGGAGATGATCAAGATGAAGGAAAAACTAAAAGAGTAATTGGAACACATGGTTATATGGCACCTGAATATGCCATTGACGGACTATTCTCTACAAAATCTGATGTATTTAGTTTTGGCATATTATTGCTAGAAATTGTGAGTGGAAAGAAAAATAGAGGACTTACATACTCAAGCAACAACCATAATCTTGTTGGGCATGCTTGGAGTTTGTGGAAAGATGGAAATTCAAAAGAGCTTATTGATGTTTGTTTTGGAGACTCGTATATTCTATTTGAAGCTTTACGATGCATACAAGTTGGTCTTTTATGTGTACAACGTCATCCTAATGACAGACCAAATATGACATGTGTGCTTGCAATGTTGACAAATGAAACTATTTTAGCTCAACCAAATGAACCGGGTTTCAAAATAAAAAAGATCTCTAATGATGAAGAATCTACAGCAAAGTCTTGCTCAATCAATGATGTCACTATTACCTTATTAGATGTTAGATGA 5178 0.3517 MNIIFSSIILTTLLTRHIYIYINTYEYKVCIACIQFKHSKITNMLPIIELVITSNLILLLFFFSQLSTAIDTITQFQSLNDDGTTLVSNDGTFELGFFRPGSSTNGYVGIWYKNIPKRRIVWVANRDNPIKGNNSNSTMLVISKEGNLVLLTNNNQTLVWSTNITTQLLSNTSSHVAQLLDNGNFVIKDKYNSDQQSKNFIWQGFDFPCDTMMPEMKLGWDLKTGLNRQLTSWKNWDDPSSGDLTWGIVLSSNPETVLKKGSIEIYRSGPWNGVDFSGYPALTVTQIVDKKVVNNSNEVYYKYSLVNKSTISILYLNQTLFRRQRLTWILEENTWRVYDSVPRDDCDYYNPCGPYGNCIPNNSPICQCLDGFEPKSLESWNSYNWTQGCVRKGKETSSCGVNDGFGRFSGLKLPATTHTWVDANMTLENCKNKCFENCSCTAYSNLDVRGDGSGCSIWFGDLIGLKQVSSVQQDLYVRMDASNVDSNGDISGWHDKKSHTLAIAITIPLIIVLLLMLIVFYVHKRKTKQRAKNEDEDGRYLELPFFKLSTIIDATNDFSNDNKLGEGGFGPVYKGILAPERQVIAVKRLSGSSKQGTKEFKNEVILCAKLQHRNLVKVLGCCIQGKERMLIYEYMPNKSLDSFLFDSAQKKLLDWSTRFNIICGIARGLLYLHQDSRLRIIHRDLKPSNILLDSDMNPKISDFGLAKICGDEQVEGNTNKVVGTHGYMAPEYAIDGVFSIKSDVFSFGILLLEIVSGRKNKGISYPRNNDNLVGNAWRLWKEGNSKELVDDCFGESYIVSEALRCIQVGLLCLQQHPSDRPNMVSVLAMLTNETNLTQPKEPGFIIKRVIKEGESTLENVMSSSINEVTISLDARVCIACIQFKHSKITNMLLIIELVITSNLILLFFFSQLSTAIDTITQFQSLNDDGTTLVSNDGTFELGFFRPGSSTNRYVGLWYKNIPNRRIVWVANRDNPIKDNKSNSTMLVISKEGNLVLLTNNNQTLVWSTNITTQLLSNTSSHVAQLLDNGNFVIKDKYNSDQQSKNFIWQGFDFPCDTMMPEMKLGWDLKTGLNRQLTSWKNWDDPSSGDLTWGIVLSSNPDTVLKKGSIEIYRSGPWNGVYFSGYPALTVTEIVDKKFVNNSNEVYYKYSLVNKSTISILYLNQTLFRRQRLTWIPEENTWRVYDSVPRDDCDYYNPCGPYGNCIPNNSPICQCLDGFEPKSLESWNSYNWTQGCVRKGKETSSCGVNDGFGRFSGLKLPATTHTWVDANMTLENCKNKCFENCSCTAYSNLDVRGDGSGCSIWFGDLIDLKQVSSVQQDLYVRMDASNIDSNGDISGGHKTSHTLTNAITLPLVFVLLLTIIVFYICKKRKQRDKSKDITLAEAEDEDLQDFDLPFFNFSTMISATKNFSNNNKLGEGGFGPVYKGTLTTNGQEIAIKRLSGCSRQGSKEFKNEVILCAKLQHRNLVKVLGCCIQGEERMLVYEYMPNKSLDSFLFDPAQKKLLDWSTRFNIICGVARGLIYLHQDSRLRIIHRDLKPSNILLDNNMNPKISDFGLAKICGDDQDEGKTKRVIGTHGYMAPEYAIDGLFSTKSDVFSFGILLLEIVSGKKNRGLTYSSNNHNLVGHAWSLWKDGNSKELIDVCFGDSYILFEALRCIQVGLLCVQRHPNDRPNMTCVLAMLTNETILAQPNEPGFKIKKISNDEESTAKSCSINDVTITLLDVR* 1726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4926 1725 CDD B_lectin 928 1054 IPR001480 -
Tpr3g4926 1725 Pfam Protein kinase domain 559 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4926 1725 ProSiteProfiles PAN/Apple domain profile. 1245 1327 IPR003609 -
Tpr3g4926 1725 CDD PAN_AP_plant 1242 1324 - -
Tpr3g4926 1725 SMART blect_4 923 1054 IPR001480 -
Tpr3g4926 1725 SMART blect_4 77 208 IPR001480 -
Tpr3g4926 1725 CDD PAN_AP_plant 396 478 - -
Tpr3g4926 1725 ProSiteProfiles PAN/Apple domain profile. 399 481 IPR003609 -
Tpr3g4926 1725 Pfam S-locus glycoprotein domain 266 376 IPR000858 GO:0048544
Tpr3g4926 1725 Pfam S-locus glycoprotein domain 1112 1222 IPR000858 GO:0048544
Tpr3g4926 1725 SUPERFAMILY Protein kinase-like (PK-like) 1395 1693 IPR011009 -
Tpr3g4926 1725 SUPERFAMILY alpha-D-mannose-specific plant lectins 966 1085 IPR036426 -
Tpr3g4926 1725 ProSiteProfiles EGF-like domain profile. 1188 1224 IPR000742 -
Tpr3g4926 1725 ProSiteProfiles Bulb-type lectin domain profile. 916 1046 IPR001480 -
Tpr3g4926 1725 Gene3D Hepatocyte Growth Factor 395 477 - -
Tpr3g4926 1725 Gene3D Hepatocyte Growth Factor 1241 1324 - -
Tpr3g4926 1725 CDD STKc_IRAK 1416 1684 - -
Tpr3g4926 1725 Pfam D-mannose binding lectin 120 234 IPR001480 -
Tpr3g4926 1725 Pfam D-mannose binding lectin 966 1080 IPR001480 -
Tpr3g4926 1725 ProSiteProfiles Protein kinase domain profile. 558 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4926 1725 Gene3D - 64 204 IPR036426 -
Tpr3g4926 1725 Gene3D - 910 1050 IPR036426 -
Tpr3g4926 1725 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 79 869 - -
Tpr3g4926 1725 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 925 1719 - -
Tpr3g4926 1725 SMART serkin_6 558 830 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4926 1725 SMART serkin_6 1410 1682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4926 1725 ProSiteProfiles EGF-like domain profile. 342 378 IPR000742 -
Tpr3g4926 1725 SMART egf_5 345 390 IPR000742 -
Tpr3g4926 1725 SMART egf_5 1191 1236 IPR000742 -
Tpr3g4926 1725 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 79 869 - -
Tpr3g4926 1725 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 925 1719 - -
Tpr3g4926 1725 ProSiteProfiles Protein kinase domain profile. 1410 1687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4926 1725 Pfam Domain of unknown function (DUF3403) 1683 1725 IPR021820 GO:0004674
Tpr3g4926 1725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 680 692 IPR008271 GO:0004672|GO:0006468
Tpr3g4926 1725 Gene3D Transferase(Phosphotransferase) domain 1 635 843 - -
Tpr3g4926 1725 Gene3D Transferase(Phosphotransferase) domain 1 1487 1696 - -
Tpr3g4926 1725 CDD STKc_IRAK 564 832 - -
Tpr3g4926 1725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1532 1544 IPR008271 GO:0004672|GO:0006468
Tpr3g4926 1725 Pfam PAN-like domain 1245 1311 IPR003609 -
Tpr3g4926 1725 Pfam PAN-like domain 399 463 IPR003609 -
Tpr3g4926 1725 ProSiteProfiles Bulb-type lectin domain profile. 70 200 IPR001480 -
Tpr3g4926 1725 Gene3D Phosphorylase Kinase; domain 1 1368 1486 - -
Tpr3g4926 1725 Gene3D Phosphorylase Kinase; domain 1 520 634 - -
Tpr3g4926 1725 SUPERFAMILY alpha-D-mannose-specific plant lectins 120 239 IPR036426 -
Tpr3g4926 1725 SUPERFAMILY Protein kinase-like (PK-like) 540 848 IPR011009 -
Tpr3g4926 1725 SMART ntp_6 1246 1325 IPR003609 -
Tpr3g4926 1725 SMART ntp_6 400 479 IPR003609 -
Tpr3g4926 1725 CDD B_lectin 82 208 IPR001480 -
Tpr3g4926 1725 Pfam Protein tyrosine and serine/threonine kinase 1413 1612 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4926 Tpr-Chr3 53828243 53842130 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4926 480 856 Receptor kinase-like Gene Family AT4G23190 50.773 2.31e-118 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr3g4926 PK_Tyr_Ser-Thr 3.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4926 - - jre:109013535 1776.14