Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4910 ATGGATAGGGTTCAAGAGGCAGATGAAAATAATAAAACTTCAGTTGTTGGTCTAGCAATCAAGGGTAATAAGAAAAGCAAATATGTTGTACAATGGGCACTTGATAAATTTGTTCATGAAGGGATAAGTATCTTCAAGCTAATTCATGTTAGAGCTGTTATAAATGGAGTTCCTACACCAATGGGAGATGTGCTTCCTATTTCACAAGTACGAAATGATGTAGCAAATGCTTTCAGAAGGGAAGTGGAGTGGCAAACAAATCAAATGCTTCTACCTTTTAAGAGTTTGTGTGAGCAGAGAAAGGTGCGTGTAGATGTTGTAGTGATTGAATCAGATGATGTAGCAACTGCAGTAGCAGAGGAAGTATCTAAGAATGTTATTACCAAACTTGTCCTTGGAGCTTCATCTTCTGGTATATTTAAAAGCAAACAGAAGGGTCTGTCTGCAAAAATATCAGTACGCACTCCAAGATTTTGTACAGTTTATGCTGTTTCGAAAGGAAAATTGTCCATACGGCAGTCAGACATGCAGACTGACGGAAACATTGTAGATGATACCACCAGTGAAACCAGTTTTTCGTCGAGCAGCTCATCGAACTACACTTCCACCTCTCAGACAGATTTTGGCTCAGTTGCATCATCTGCGGCTTTACATTCCTATCCCTTGACAACACGACGACATAAAGCTCTCTCGAGTATAGATCAGACCCTTCTAAGCACGAGTCCTAATTTAAGTGAAACTAATCATTTTAGAGGCCAGTCTCTAGATCTTGGGAGAAAGAATGATGCTATAAGTTCAGATATTGATCATGCTCTAACCCAGGCCTCTAGTGGCGGAAGCATTTCAGATACTGAATCTTCCATTTACGGTCAAAATCATGCCAAGTATGTGCCACAAGGTACTAAACCTCCAAAACCAAATAGACAGGAAAATTATAACCTTGAGCTGGAAAAGTTGAGACTTGAACTAAGACATGCACAAGGAATGCATGCAGTAGCTCAAAGTGAGAACATTGATGCATCACAAAAGCTGAATGAACTAAACAAGAGAAGATTAGAAGAATCCATGAAAATGAAGGAGATTGTTGCTAACGAGGAGATGGCCGAGGAATTAGCAAATCAAGAAAGAGAGAAATATGAAGCTGCAGTAAGAGAAGCCGAATATCTGAAACATCGTGCTGGAAGAGAAGCTGCAGAAAGAAAAGAAGCCGAGTTAAAAGCTATTCATGCTGCCAAAGAGAAAGAAAAGCTTGAGGGTGCTCTGAGTGGTTCCACACCTCCGTACCGAATCTTTACGTGGGATGAAATAGTTTCAGCTACTTCGTCTTTCTCTGAAGATCTGAGAATCGGAATGGGTGCATATGGAGTAGTGTATAAGTGCACTTTGCATTACACAACTGTTGCTGTTAAAGTTCTTCACTCTAATGGAAACTGCCAAAGCAAGCAATTCCAGCAAGAGTTAGAGATATTGAGCAGAATTCATCATCCAAACTTGCTTCTTCTTCTTGGTGCATGTCCTGATCACGGATGCCTTGTGTACGAATACATGGAAAATGGAAACTTGGAGGACAGACTACTCCAGAAAAACAGTAATGACCCAATCCCATGGTTTGATAGGTTTCGAATAGCTTGGGAAATTGCGTCAGCACTTTCCTTTCTTCACAGCTCGAAGCCGCAACCTATCATCCATCGTGACTTGAAACCGGCAAACATCTTGCTTGGTCATAACCTTGTCAGCAAGATTGGTGATGTCGGTCTTTCTACAATCCTAAATTCAGATGATTTATCTGCCATGTATAAGGACACCGCGCCTGTTGGAACACTCAGCTACATTGATCCTGAGTATCAAAGGAGTGGTTTAATATCTACAAAATCTGATGTTTATGCTTTTGGATTAGTAATCTTACAGTTATTGACAGCAAAACCAGCCATAGCACTTACTCATTTAGTTGAAACAGCTATTGATGGTGGTAATTTATCAGATGTATTGGATCCAAAAGCAGGATCATGGCCACTACAAGAGACACTAGACATAGCTCGGTTAGCATTGAGCTGTGCGGAGATGAAGCGTAAGGATCGACCTGATTTGAAAAATCATGTGCTACCAATGCTAGACAGGTTGAAACATGTTGCTGATGAGGCTCAAGCTCAATATTCTGCTTCAATAGTTACTATAAAATCCAGAGCTCCCAACCATTTTATATGCCCTATACTTCAGGATGTGATGGATGATCCTTGTGTTGCCGCAGATGGATATACATACGATCGCAATGCAATTGAAAAGTGGCTTCTAAAGAATGACAAATCGCCGATGACAAATATGGTTTTACCTCATAAGCATCTAATTCCTAATTATACACTTCTATCTGCAATTTTGGAGTGGAAAACCTCATAA 2394 0.4027 MDRVQEADENNKTSVVGLAIKGNKKSKYVVQWALDKFVHEGISIFKLIHVRAVINGVPTPMGDVLPISQVRNDVANAFRREVEWQTNQMLLPFKSLCEQRKVRVDVVVIESDDVATAVAEEVSKNVITKLVLGASSSGIFKSKQKGLSAKISVRTPRFCTVYAVSKGKLSIRQSDMQTDGNIVDDTTSETSFSSSSSSNYTSTSQTDFGSVASSAALHSYPLTTRRHKALSSIDQTLLSTSPNLSETNHFRGQSLDLGRKNDAISSDIDHALTQASSGGSISDTESSIYGQNHAKYVPQGTKPPKPNRQENYNLELEKLRLELRHAQGMHAVAQSENIDASQKLNELNKRRLEESMKMKEIVANEEMAEELANQEREKYEAAVREAEYLKHRAGREAAERKEAELKAIHAAKEKEKLEGALSGSTPPYRIFTWDEIVSATSSFSEDLRIGMGAYGVVYKCTLHYTTVAVKVLHSNGNCQSKQFQQELEILSRIHHPNLLLLLGACPDHGCLVYEYMENGNLEDRLLQKNSNDPIPWFDRFRIAWEIASALSFLHSSKPQPIIHRDLKPANILLGHNLVSKIGDVGLSTILNSDDLSAMYKDTAPVGTLSYIDPEYQRSGLISTKSDVYAFGLVILQLLTAKPAIALTHLVETAIDGGNLSDVLDPKAGSWPLQETLDIARLALSCAEMKRKDRPDLKNHVLPMLDRLKHVADEAQAQYSASIVTIKSRAPNHFICPILQDVMDDPCVAADGYTYDRNAIEKWLLKNDKSPMTNMVLPHKHLIPNYTLLSAILEWKTS* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4910 797 PANTHER OS02G0152300 PROTEIN 12 795 - -
Tpr3g4910 797 SUPERFAMILY RING/U-box 727 796 - -
Tpr3g4910 797 Pfam U-box domain 729 795 IPR003613 GO:0004842|GO:0016567
Tpr3g4910 797 Coils Coil 357 385 - -
Tpr3g4910 797 Gene3D Transferase(Phosphotransferase) domain 1 516 728 - -
Tpr3g4910 797 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 35 12 795 - -
Tpr3g4910 797 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 729 797 IPR013083 -
Tpr3g4910 797 Coils Coil 309 350 - -
Tpr3g4910 797 Gene3D Phosphorylase Kinase; domain 1 422 515 - -
Tpr3g4910 797 MobiDBLite consensus disorder prediction 180 199 - -
Tpr3g4910 797 SUPERFAMILY Protein kinase-like (PK-like) 424 697 IPR011009 -
Tpr3g4910 797 ProSiteProfiles Protein kinase domain profile. 443 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4910 797 CDD STK_N 15 167 - -
Tpr3g4910 797 SMART serkin_6 443 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4910 797 Pfam Protein tyrosine and serine/threonine kinase 448 698 IPR001245 GO:0004672|GO:0006468
Tpr3g4910 797 SMART Ubox_2 732 794 IPR003613 GO:0004842|GO:0016567
Tpr3g4910 797 Coils Coil 395 420 - -
Tpr3g4910 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 561 573 IPR008271 GO:0004672|GO:0006468
Tpr3g4910 797 Gene3D HUPs 7 144 IPR014729 -
Tpr3g4910 797 ProSiteProfiles U-box domain profile. 728 797 IPR003613 GO:0004842|GO:0016567
Tpr3g4910 797 ProSitePatterns Protein kinases ATP-binding region signature. 449 470 IPR017441 GO:0005524
Tpr3g4910 797 CDD RING-Ubox_WDSUB1_like 733 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4910 Tpr-Chr3 53721188 53726380 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4910 15 797 U-box Gene Family AT4G25160 50.667 0.0 811
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Tpr3g4910 PK_Tyr_Ser-Thr 4.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4910 - - gsj:114409387 1156.74