Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4907 ATGGAGGAAAGTGTTTTTGTTTCTAAAAAATTAAATGAACTTGATGGTGATGATTATTTGATGGTTGAAAAATTACTAAATTTGCGTTCTGAGTCTTTAGCTAATCAATTCAAAGATGATGTGTCTCGTGTTTTTCGTTCGAACAACAATGATTCTAGGTCTGTTTGTTGCAACAATGATTCTAGGTCGAAAATAAGAATCCAGCAACCAAAGACAAATGATTGTGGCAGTGGCAGTCTTAAGTTTTGTATGCTTGAATCAAAGAATCACGAGGTTGCTGCTTGTAGACGCGATGAGCGTGTTGGCAAAATGATTCTCAAGATAAGAACAAGTGATCTATCGGCAAGAGTTGATTTTGTTGGCAATGTTGGTACAAAGAATAATGAGGCGGCTTCCGAGAAAAGTTTGTCCGATGAGGGTTCGGAGAAGAAACACAATCATGAGGTTGTTGCTTGTAGGCACGATGAGAGTGTTGGGAAAAGGATTATCAAGATAAGAACAAATGATCGATCGCTGAGAGTTGATTTTGGCAATCTTGATCTAAAGAATCATGAGGCGGCTGCCGAGGAAACTTCATCCGATGAGGGTTCCAAGAAGGAGATGAAGAAAAGAAAAGCTACGGATGAAAGATCAAGCAAACCGTCAAAGAAACGCAAGAACCCCAAAAACAACAATAATGTTAATGACCAGATAGAAGAAGAGTACCCTGAGCTTCCATTGGCATTTAAAGAAAAGATTGAACAAATGGAAGGTAGTGAGGTGAAGTTGGTGATCCAGAAGAAACTAACCGCGAGTGACGTGACCAAAAGCAAAAGCCGCTTCTCCATTCCAATAAAGAAGATGATTAAAGATTGTAATTTTTTGAGACCAGAAGAGGAATCGTCTTTGGATTATGCGCGTCAAAAGAAAACAGATGGGAAGAAGCTTGATGGTATGTTAGTCTCCGTGTTGGATCCGAATCTTATACTCCACGATGGTATTTGCTTCAAGAAGTGGAAAATGGCGAAGAATAATGAGATTTACAATCTCACAAAAAAATGGAACCATCTTGTAGCAAAAAACTGTTTCAAAGAAAAGGAAAAGGTGCAACTCTGGTCTTTTAGAAGCCATAAAAAACTCTACTTTGCACTCGTCAAGCTCCAGCCAAGATCGATTAGTCAATGA 1164 0.3883 MEESVFVSKKLNELDGDDYLMVEKLLNLRSESLANQFKDDVSRVFRSNNNDSRSVCCNNDSRSKIRIQQPKTNDCGSGSLKFCMLESKNHEVAACRRDERVGKMILKIRTSDLSARVDFVGNVGTKNNEAASEKSLSDEGSEKKHNHEVVACRHDESVGKRIIKIRTNDRSLRVDFGNLDLKNHEAAAEETSSDEGSKKEMKKRKATDERSSKPSKKRKNPKNNNNVNDQIEEEYPELPLAFKEKIEQMEGSEVKLVIQKKLTASDVTKSKSRFSIPIKKMIKDCNFLRPEEESSLDYARQKKTDGKKLDGMLVSVLDPNLILHDGICFKKWKMAKNNEIYNLTKKWNHLVAKNCFKEKEKVQLWSFRSHKKLYFALVKLQPRSISQ* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4907 387 MobiDBLite consensus disorder prediction 185 233 - -
Tpr3g4907 387 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 135 382 IPR005508 GO:0003677
Tpr3g4907 387 Gene3D - 247 382 IPR015300 -
Tpr3g4907 387 MobiDBLite consensus disorder prediction 132 152 - -
Tpr3g4907 387 Pfam B3 domain-containing protein At2g31720-like 245 352 IPR005508 GO:0003677
Tpr3g4907 387 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED 135 382 - -
Tpr3g4907 387 MobiDBLite consensus disorder prediction 185 215 - -
Tpr3g4907 387 MobiDBLite consensus disorder prediction 128 152 - -
Tpr3g4907 387 SUPERFAMILY DNA-binding pseudobarrel domain 257 378 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4907 Tpr-Chr3 53704685 53705848 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4907 237 377 B3 DNA Binding Superfamily AT1G05930 26.389 6.66e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4907 - - mtr:MTR_5g092880 320.472