Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4886 ATGGAAGCCAACACATTTGCAATTTTCATCTTCCTAGCAATATCTAGCATTGCTTTAGCATGTGATGAAAATTCTACCAATTCAACCAAAACCAACCTTACCTACACTTACACTAGCACCTCCAATTCCACCCAAAAAAATAATGTCAAAACCTATATTAAAAATTCATGCAATTCAACCACATATCCATATATATGCTACAAATCTTTATCTCCATATGCTTCAAAAATTGAAGAAGATCCTTTAAAATTATGCAACATCTCTCTTTCGGTGGCGTTAAAGGCGGCTCGCGGCGCATCCTCCGCCGTATCGAAGGTTCTAAACAACAATGACAATACATTGTCAAGCATTGGTGAAGAAGTTGTACAAGATTGTTTTAGCAATTTGAAGGATTCAATAGAACAATTGCAAGATTCTCTTGATGCCATGACAAATTTGGATGTTGATTTTGATAGAGAATTTCAAATTAGTAACATAAAGACTTGGGTTAGTTCTGCTATAACTAATGATCAAACTTGCTATGATGGATTTGATGAGATGAATGTGGATTCATCAATTAGGGACAAAATCAGAAGTAGAGTTTTGAATGTGGCAAGGAAGACTAGCAATGCTTTGTATTTTATCAACAATAACATATATTAA 642 0.3427 MEANTFAIFIFLAISSIALACDENSTNSTKTNLTYTYTSTSNSTQKNNVKTYIKNSCNSTTYPYICYKSLSPYASKIEEDPLKLCNISLSVALKAARGASSAVSKVLNNNDNTLSSIGEEVVQDCFSNLKDSIEQLQDSLDAMTNLDVDFDREFQISNIKTWVSSAITNDQTCYDGFDEMNVDSSIRDKIRSRVLNVARKTSNALYFINNNIY* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4886 213 SMART PMEI_2 48 207 IPR006501 GO:0004857
Tpr3g4886 213 Gene3D Invertase/pectin methylesterase inhibitor family protein 48 211 IPR035513 -
Tpr3g4886 213 Pfam Plant invertase/pectin methylesterase inhibitor 52 205 IPR006501 GO:0004857
Tpr3g4886 213 CDD PMEI-like_3 56 210 - -
Tpr3g4886 213 PANTHER PECTINESTERASE INHIBITOR-LIKE 5 211 - -
Tpr3g4886 213 TIGRFAM PME_inhib: pectinesterase inhibitor domain 38 210 IPR006501 GO:0004857
Tpr3g4886 213 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 51 210 IPR035513 -
Tpr3g4886 213 Coils Coil 126 146 - -
Tpr3g4886 213 PANTHER PECTINESTERASE INHIBITOR 4 5 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4886 Tpr-Chr3 53527825 53528666 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4886 25 210 Carbohydrate Esterase AT1G53830 25.806 1.25e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4886 - - gmx:100527443 242.662