Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4885 ATGGCAACAAAGTTAACTCTTCTCTTCCTTCTCTCAACTCTCCTCATAATTGCAACTTCAACACCAACAAATTTCATAAAATCCTCATGTAGCACAACATCATATCCAACACTTTGTGTTGAATCACTCTCCAGCTATGCATCAACAATCCAACAAGATCCTCACCAATTAGTCCAAACAGCTTTATCACTTAGCCTCAACAAAACTCAATCCACTAAAAGCTTTGTTACAAAATGCAAAAGTTTTAAGAATCTTAAACCAAGAGAATATGCTGCTCTTCATGATTGTGTTGAAGAAATCACTGATAGTGTTGATAGACTTAGCCGTTCATTAAAAGAGCTTAAACTTTGCAAGGTTAGTGGTCAAGATTTCAATTGGCATATAAGCAATGTTGAGACATGGGTGAGCTCAGCTTTGACTGATGAAAGTACTTGTAGTGATGGATTTGGTGGAAAAGCACTTGATGGAAGAATGAAAGCTTCTATTAGATCTAAAATGGTTAATGTTGCTCAAGTTACTAGTAATGCTCTTTCACTTATCAATCAATATGCTACTAATCACTAG 564 0.3564 MATKLTLLFLLSTLLIIATSTPTNFIKSSCSTTSYPTLCVESLSSYASTIQQDPHQLVQTALSLSLNKTQSTKSFVTKCKSFKNLKPREYAALHDCVEEITDSVDRLSRSLKELKLCKVSGQDFNWHISNVETWVSSALTDESTCSDGFGGKALDGRMKASIRSKMVNVAQVTSNALSLINQYATNH* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4885 187 CDD PMEI-like_3 28 185 - -
Tpr3g4885 187 SMART PMEI_2 21 179 IPR006501 GO:0004857
Tpr3g4885 187 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 8 186 - -
Tpr3g4885 187 Gene3D Invertase/pectin methylesterase inhibitor family protein 21 183 IPR035513 -
Tpr3g4885 187 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 186 - -
Tpr3g4885 187 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 24 183 IPR035513 -
Tpr3g4885 187 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 183 IPR006501 GO:0004857
Tpr3g4885 187 Pfam Plant invertase/pectin methylesterase inhibitor 24 179 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4885 Tpr-Chr3 53523732 53524584 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4885 26 180 Carbohydrate Esterase AT3G14310 30.128 3.90e-21 88.2