Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4868 ATGAAAAAAAGAGAAGAAATCAAACCAATTCAAACACCATCAACAAAAATGTCATGTAAATTTTCACCAACAAGAACAACAAGTGTTATTGTTCTTCATATGTTTGTTTCATTCATAACACTAACCTTAACAACATCAACAACAACAACAACAACAACCTTTGATTCAACAACGTTGTTGTTAAACAATTTCAAACACTCAAACATAATTTCTGATCCAAAAAACTTCCTTTCAAATTGGTCACTTTCTTCTTCCCCTTGTTTATGGCAAGGTATCACTTGTTCACTTTCCGGCCAAATCACCACCGTTAACCTCACCGGAGCTTCACTTTCTGGTAAAAGTTTCAATCTTTTCACCTTCACTTCAATACCCACTTTACAAAACCTTCTCTTACATGGAAATTCCTTCACTTCTTTCAACCTCTCTGTTTCAAAACCTTGTTCTCTTGTCACACTTGATCTTTCTTCCACCAATTTCTCAGGAATTTTCCCTTTTGAAAATTTTGTTACTTGTTATAGTCTTAGTTACCTCAATTTGTCTAGAAATTTGATAACTTCAACAAATAATAATTTTTTAGGGTTTGGTTCTTCTTTGATTCAACTTGATATGTCTAGAAACATGTTTTCTGATGTTGATTTTGTTGTTGAAGTTGTTACAAAGTTTGAAAGTTTGGTTTTTGTTAATTTTTCTGACAACAAAATCCATAGTCAAATCAGTGATTCACTTGTTCCTTCTGTGAATTTGTCAACTTTGGATTTGTCTCATAATTTGTTGTTTGGAAAATTACCCTCTAAAATTGTTGGTGATAGTGTTAAAATTTTGGATCTTTCAAGCAACAATTTTTCATTAGGGTTTTCTGAGTTTGATTTTGGGGATTGTAAGAAACTTGTTTGGTTGAATTTATCTCACAATGTGATATCCGATTTTGAGTTTCCACAAAGTTTGAGAAATTGTCAAGTGTTGGAAAGTTTGGATCTTTCTCAAAATCAATTTAAGATGAAGATTCCTGGTGTTGTTCTTGGTGAGTTGAAGAATTTGAAGGAACTTTATTTAGGGAATAATCTATTTTATGGAGAAATATCTAAGGAGCTTGGAAGTGTTTGTGAGAGTTTGGAAATTCTTGATCTTTCTATGAATAAGCTTTCTGGTGAGTTTCCTTTGGTTTTTGAAAAATGTTCATCTTTGACGAGTCTTAACCTAGCTAAGAATTTTCTATATGGTAATTTCCTTGAAAATGTTGTTAGCAAACTCTCTAGTCTTAGATATCTCTATGTGTCATTCAACAACATAACCGGAAATGTTCCTTGGTCGATTGTTGCAAATTGTACACAGCTTAAAGTTCTTGACCTAAGTTCGAATGGTTTCACCGGCGATGTTCCTTCGATGTTTTGTCCTTCGAAATTGGAGAAGTTGCTTCTAGCTGGTAATCACCTTTCAGGGAATGTTCCCGCAAAACTCGGTGAATGCAAGAGTTTGAGAACAATTGATTTTAGCTTTAATAATTTGAGTGGTTCAATACCTAAGGAAGTTTGGTTTTTGCCTAATCTTTCTGACTTGATTATGTGGGCGAATAGTCTCTCCGGCGAGATTCCTGAAGGAATTTGTGTCAATGGAGGAAACCTCGAAGCATTGATTCTGAACAACAATTTCATTTCTGGTTCAATTCCTAAGTCTATTGCAAATTGTACTAACATGATTTGGGTTTCGCTTGCTAGTAACCGTATTACCGGAGAAATACCTGCTGGTATTGGGAATCTGAACGAACTTGCTATTCTGCAATTAGGTAACAATTCTCTGGTTGGAAAGATTCCTCCCGACATTGGAATGTGCAAGAGACTAATATGGCTGGATTTGACTAGCAATAACCTCACCGGTTCTATTCCGTCCCAGCTTGCGAATCAAGCTGGATTGGTTATTCCGGGGAGTGTTTCGGGTAAGCAGTTTGCATTTGTGAGAAATGAAGGTGGTACTAATTGTAGAGGCGCCGGAGGACTTGTTGAGTTTGAAGATATAAGGGCTGAGAGGCTTGAAAGTTTTCCTATGGTTCATTCTTGTCCATTAACAAGAATATATTCTGGTTATACAGTTTATACTTTTACCAACAATGGAAGCATGATTTTCCTTGATCTTTCTTACAATTTCTTGTCGGGGGCTATTCCAGAAAATTTTGGCGCAATGTCCTATTTGCAGGTCTTAAATCTAGGACACAATATGCTCAATGGAAAAATTCCAGAACGTTTTGGTGATTTAAAAGCTCTAGGAGTGCTCGATATATCTCATAATAGCCTTCAAGGATTCATCCCTGGATCATTACAATCTCTATCATTTCTCAGTGACTTTGATGTGTCGAATAATAACCTTAGTGGATCAATTCCTTCTGGTGGTCAGCTAACAACTTTCCCGGCGTCTAGATACGAAAACAACTCGAACCTTTGTGGTGTTCCCTTACTGAAGAAATGCGGCAGTTCAAATCACTCGGTAACTTTGCGTACTTCGAAGAAGAAGCAACCTATTGCAGTTTTGATTGTCATTTCGCTCCTTTTCTTCCTCTTGTTTGTTGTTGTGGTTTTATTGGCTTCATATCGAGTTCAAAAGGCTCGGAAGAAGGATGAATTGAGGGAAAAGTATGTAGAAAGTCTTCCAACATCTGGTACCAGTAGTTGGAAGCTTTCAACCTTTCCTGAACCTCTGAGCATCAACGTCGCTACGTTTGAGAAGCCTTTGCGCAAGTTGACGTTCGCACATCTTCTCGAAGCTACCAACGGTTTCAGCTCAGAAAGTTTGATAGGTTCAGGAGGTTTTGGGGAAGTGTATAAGGCTAAGATGAAAGACGGAAGTGTTGTTGCTATCAAGAAACTCATTCGTGTCACAGGTCAGGGAGACAGAGAGTTCATAGCCGAAATGGAAACGATCGGGAAGATTAAGCACAGGAACCTTGTTCCACTACTTGGTTACTGTAAAGTTGGAGATGAAAGGCTACTTGTGTATGAGTACATGAAATATGGAAGTTTAGAAACTGTTCTACATGAGAGGAACAAAAGTACAAAGCTTGCTTGGGAAACAAGAAAGAAGATAGCACTAGGATCAGCAAGAGGTCTTGCATTTCTTCATCACAGTTGCATACCTCATATTATACATAGAGACATGAAGTCAAGCAATATTCTTCTCGACGAAAATTTTGAGGCTAGAGTTTCGGATTTCGGTATGGCGAGATTGGTTAATGCTCTTGACACTCATCTCACAGTTAGCACACTTGCAGGAACACCAGGTTATGTACCACCTGAATACTATCAAAGTTTTCGATGCACAGCAAAAGGTGATGTTTATAGTTACGGTGTCATACTGTTAGAACTTCTATCAGGGAAGAGACCGATCGATTCTTCCGAGTTCGGAGATGATAACAATCTTGTTGGATGGTCTAAGAAGCTTTATAGAGAAAGAAGAATTATTGAAATACTTGATCCTGATTTGGTTACGCAAACATCCAGTGAAGGTGAACTTTTTCAATATTTGAGAATTGCTTTTGAATGTTTAGAGGAAAGACCGTATCGGCGTCCGACGATGATACAAGTGATGGCGATGTTTAAAGAGCTTCAAGCTGATACAGATAATGATAGTGTTGTTGATGGTTTCTCTATGAAAGACAATGTTATTGATGAAACATGA 3666 0.3734 MKKREEIKPIQTPSTKMSCKFSPTRTTSVIVLHMFVSFITLTLTTSTTTTTTTFDSTTLLLNNFKHSNIISDPKNFLSNWSLSSSPCLWQGITCSLSGQITTVNLTGASLSGKSFNLFTFTSIPTLQNLLLHGNSFTSFNLSVSKPCSLVTLDLSSTNFSGIFPFENFVTCYSLSYLNLSRNLITSTNNNFLGFGSSLIQLDMSRNMFSDVDFVVEVVTKFESLVFVNFSDNKIHSQISDSLVPSVNLSTLDLSHNLLFGKLPSKIVGDSVKILDLSSNNFSLGFSEFDFGDCKKLVWLNLSHNVISDFEFPQSLRNCQVLESLDLSQNQFKMKIPGVVLGELKNLKELYLGNNLFYGEISKELGSVCESLEILDLSMNKLSGEFPLVFEKCSSLTSLNLAKNFLYGNFLENVVSKLSSLRYLYVSFNNITGNVPWSIVANCTQLKVLDLSSNGFTGDVPSMFCPSKLEKLLLAGNHLSGNVPAKLGECKSLRTIDFSFNNLSGSIPKEVWFLPNLSDLIMWANSLSGEIPEGICVNGGNLEALILNNNFISGSIPKSIANCTNMIWVSLASNRITGEIPAGIGNLNELAILQLGNNSLVGKIPPDIGMCKRLIWLDLTSNNLTGSIPSQLANQAGLVIPGSVSGKQFAFVRNEGGTNCRGAGGLVEFEDIRAERLESFPMVHSCPLTRIYSGYTVYTFTNNGSMIFLDLSYNFLSGAIPENFGAMSYLQVLNLGHNMLNGKIPERFGDLKALGVLDISHNSLQGFIPGSLQSLSFLSDFDVSNNNLSGSIPSGGQLTTFPASRYENNSNLCGVPLLKKCGSSNHSVTLRTSKKKQPIAVLIVISLLFFLLFVVVVLLASYRVQKARKKDELREKYVESLPTSGTSSWKLSTFPEPLSINVATFEKPLRKLTFAHLLEATNGFSSESLIGSGGFGEVYKAKMKDGSVVAIKKLIRVTGQGDREFIAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEYMKYGSLETVLHERNKSTKLAWETRKKIALGSARGLAFLHHSCIPHIIHRDMKSSNILLDENFEARVSDFGMARLVNALDTHLTVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKRPIDSSEFGDDNNLVGWSKKLYRERRIIEILDPDLVTQTSSEGELFQYLRIAFECLEERPYRRPTMIQVMAMFKELQADTDNDSVVDGFSMKDNVIDET* 1222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4868 1221 Pfam Brassinosteroid receptor island domain 636 700 IPR045381 -
Tpr3g4868 1221 ProSiteProfiles Leucine-rich repeat profile. 295 316 IPR001611 GO:0005515
Tpr3g4868 1221 Gene3D Phosphorylase Kinase; domain 1 886 998 - -
Tpr3g4868 1221 Pfam Leucine rich repeat 419 478 IPR001611 GO:0005515
Tpr3g4868 1221 Gene3D Transferase(Phosphotransferase) domain 1 999 1216 - -
Tpr3g4868 1221 Pfam Protein kinase domain 924 1193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4868 1221 SUPERFAMILY L domain-like 63 405 - -
Tpr3g4868 1221 Pfam Leucine Rich Repeat 755 774 IPR001611 GO:0005515
Tpr3g4868 1221 Pfam Leucine rich repeat N-terminal domain 61 95 IPR013210 -
Tpr3g4868 1221 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1044 1056 IPR008271 GO:0004672|GO:0006468
Tpr3g4868 1221 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 36 1206 - -
Tpr3g4868 1221 SUPERFAMILY L domain-like 435 805 - -
Tpr3g4868 1221 SUPERFAMILY Protein kinase-like (PK-like) 907 1202 IPR011009 -
Tpr3g4868 1221 ProSiteProfiles Protein kinase domain profile. 923 1198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4868 1221 Gene3D Ribonuclease Inhibitor 52 170 IPR032675 -
Tpr3g4868 1221 Gene3D Ribonuclease Inhibitor 189 820 IPR032675 -
Tpr3g4868 1221 ProSitePatterns Protein kinases ATP-binding region signature. 929 952 IPR017441 GO:0005524
Tpr3g4868 1221 SMART serkin_6 923 1195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4868 1221 PANTHER SERINE/THREONINE-PROTEIN KINASE BRI1-LIKE 1 36 1206 - -
Tpr3g4868 1221 Gene3D - 643 700 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4868 Tpr-Chr3 53389649 53393685 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4868 54 1220 Receptor kinase-like Gene Family AT1G55610 60.711 0.0 1416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Tpr3g4868 Pkinase 9.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4868 - - gmx:100779072 1673.29