Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4867 ATGGCTGGGATTGATGAAAATCTTGCACTTAATGGTGATTGGGGTCTTCCTAGTCCAAGTCCAAGGACCCTGTTTTCTAGAATGTTAGAAGAAGAAAACAATGTAATAAGACCAAATTCAGAACATTCTGGAAATGGTAGGACTGAGGCACAAGATGGTGATTCCGGTACACAATTGAGCGACATGAGTTATCCGACCGAGCAAAAATCGAGTTCGCGGGGTGGCCTTGTTGATAGAATTGCTGCTAGAACTGGATTTAATGCTCCAAGGCTGAATACAGAAAGCATTAGATCTACTGAACTTTCACTCAATTCTGAGATTCAGTCTCCTTATTTAACTATACCGCCTGGTCTTAGTCCTACTACACTTTTAGATTCTCCTGTGTTCCTTGTGAATTCATTGGCACAACCATCTCCAACAACAGGAAAGTTTCCATTTGTTTCAAACGGCAACATCCGCTGCACAGAATTATCATCCGATGTTCAAGAAAAATCTAAGCAGAATGGCTTTAATGATATCTATGCATCATCCTTTGCTTTCAAGCCTGCAACTGATTCGGGGCCCTCTTTTTATCATGGTGCTGGTAGAAATATAAATCCAACAACATTTTCTCAGCAATCCCTTCATGGTATTGAAGCTTCAGTTCAATCTCAAAGAGTTGATCCAGTCAAAGTTCAAACTGAGAACAAAAGTAGCCTCCATCTTAAGGCAGAGTTCTCCAACTCTCCACCTCAAAAAGACAATTCTCCACCAATGGAAGAGCAAGCAGATGAAGAGGGAGAACAAAGAGTCAACGTTGACTCTTTGGTTGCTGGTACTCCATCAGAAGACGGATATAATTGGAGAAAATATGGCCAAAAGCAAGTTAAGGGTAGCGAGTATCCTCGAAGTTACTATAAGTGTACTCATTCAAATTGCCCGGTTAAAAAGAAAGTAGAACGTTCTCATGAGGGCCATATAACGGAGATAATCTATAAGGGGGCACATAACCACCCGAAACCTCCTCCAAGTCGCCGGGCAGGCATAGGGCCCACTAACTCCCATGCTGACATGCAAGGGGACAATCCTGAACATGGTGAACCACAGGGTGGTGGCGACGGTGATCGCGGCTGGGCTAATTTACAAAAGGGAAATATAGCTGGAGCTGGTAATTGGAAGCCTGACAACCTTGAAGCGACATCATCTCTCAACCCCGAGTACGGTAACCAGTCTACCAATCTGCAAACTCAAAATGGTACTGCTCACTTTGATTCAGGAGATGCAGTGGATGGCTCATCTACGTTTTCTAACGAAGGGGAAGATGATCAAGCTACTAATGGTAGTGTATCGTTAGCTTACGATGTGGAAGGAGATGAATCAGAGTCTAAAAGAAGGAAACTGGAATCATATGCCGAAATGAGTGGAGCTACTAGAGCCATTCGTGAGCCTAGAGTTGTTGTGCAGACTACCAGCGAAGTAGATATCCTTGATGATGGTTATCGATGGCGCAAATATGGGCAAAAAGTTGTCAAAGGAAATCCCAACCCAAGGAGTTACTACAAGTGCACCAATGCAGGGTGCACTGTAAGGAAGCATGTGGAGAGAGCATCACATGACCTTAAGTCTGTGATCACCACATATGAGGGAAAACACAATCACGACGTCCCTGCTGCTCGTTCTAGCAGTCATGTCAATGCGAACGCTTCTAACGCAGGTCAAGGGCAAGCTTCTGGTCTTCTTCAAAACCATGTTCATAGAAATGAACCATCTCAAATTCACAATGGCATTGGAAGGCCTTCATTTGGCTCATTCAACCTACCCGGAAGACAGCAGCTAGGTCACCCGCACGGCTTCTCCTTTGGCATGAATCAACACCTGTCGAACCTTGCAATGTCGGGATTAGGCTCTTCTTCGCAAGCAAAGTTTCCTGTAATGCCTATGAATCCATTCATGGCGCAACAACAACGTCCCGCAAATGAAATGGGGTTCATGTTACCAAAGGGAGAACCAAATGTGGATGCTAATCCTGAACGCAGCGGCCTTAACATGCATAATGGTTCGTCATCAATGTATCAAGATATTATGAATCACATGCCGCTTGGACCTCACATGTAA 2094 0.4427 MAGIDENLALNGDWGLPSPSPRTLFSRMLEEENNVIRPNSEHSGNGRTEAQDGDSGTQLSDMSYPTEQKSSSRGGLVDRIAARTGFNAPRLNTESIRSTELSLNSEIQSPYLTIPPGLSPTTLLDSPVFLVNSLAQPSPTTGKFPFVSNGNIRCTELSSDVQEKSKQNGFNDIYASSFAFKPATDSGPSFYHGAGRNINPTTFSQQSLHGIEASVQSQRVDPVKVQTENKSSLHLKAEFSNSPPQKDNSPPMEEQADEEGEQRVNVDSLVAGTPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHSNCPVKKKVERSHEGHITEIIYKGAHNHPKPPPSRRAGIGPTNSHADMQGDNPEHGEPQGGGDGDRGWANLQKGNIAGAGNWKPDNLEATSSLNPEYGNQSTNLQTQNGTAHFDSGDAVDGSSTFSNEGEDDQATNGSVSLAYDVEGDESESKRRKLESYAEMSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARSSSHVNANASNAGQGQASGLLQNHVHRNEPSQIHNGIGRPSFGSFNLPGRQQLGHPHGFSFGMNQHLSNLAMSGLGSSSQAKFPVMPMNPFMAQQQRPANEMGFMLPKGEPNVDANPERSGLNMHNGSSSMYQDIMNHMPLGPHM* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4867 697 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 87 622 IPR044810 GO:0003700
Tpr3g4867 697 ProSiteProfiles WRKY domain profile. 484 549 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g4867 697 SUPERFAMILY WRKY DNA-binding domain 481 549 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g4867 697 SMART WRKY_cls 275 333 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g4867 697 SMART WRKY_cls 489 548 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g4867 697 MobiDBLite consensus disorder prediction 38 73 - -
Tpr3g4867 697 MobiDBLite consensus disorder prediction 217 284 - -
Tpr3g4867 697 Gene3D WRKY domain 476 542 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g4867 697 MobiDBLite consensus disorder prediction 217 249 - -
Tpr3g4867 697 Pfam WRKY DNA -binding domain 490 546 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g4867 697 Pfam WRKY DNA -binding domain 276 332 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g4867 697 ProSiteProfiles WRKY domain profile. 276 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g4867 697 MobiDBLite consensus disorder prediction 32 76 - -
Tpr3g4867 697 PANTHER WRKY TRANSCRIPTION FACTOR 2-RELATED 87 622 - -
Tpr3g4867 697 Gene3D WRKY domain 261 335 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g4867 697 SUPERFAMILY WRKY DNA-binding domain 272 334 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4867 Tpr-Chr3 53375296 53380828 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4867 1 692 WRKY Transcription Factor Family AT5G56270 49.863 1.21e-177 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr3g4867 WRKY 3.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4867 K18835 - gmx:100127395 1035.02