Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4864 ATGAGTGGAGCTACTAGAGCCATTCGTGAGCCTAGAGTTGTTGTGCAGACTACCAGCGAAGTAGATATCCTTGATGATGGTTATCGGTGGCGCAAATATGGGCAAAAAGTTGTCAAAGGAAATCCCAACCCAAGGAGTTACTACAACTGCACCAAAGCAGGGTGCACTGTAAGGAAGCATATGGAGCGAGCATCACATGACCTTAAATCTGTGATCACTACATACGAGGGAAAGCACAATCACGATGTCCCTGCTGCTCGTTCTAGCAGTCATGTCAATGCGAACGCTTCTAACGCAGGTCAAGGGCAAGCTTCTGGTCTTCTTCAAAACCATGTTCATAGAAATGAACCATCTCAAATTCACAATGGCATTGGAAGGCCTTCATTTGGCTCATTCAACCTACCTGGAAGACAGCAGCTGGCTGACCTGGGTCACCCGCACGGCTTCTCCTTTGGCATGGATCAACACTTGTCGAACCTTGCAATGTCGGGGCTAGGCTCTTCTTCGCAAGCGAAGTTTCCTGTAATGCCTATGAATCGATTCATGGCGCAACAACAAAACCCCACAAATGAAATGGGGTTCATGTTACCAAAGGGAGAACCAAATGTGGATGCTAATCCTGAACGCAGCGGCCTTAACATGCATAATGGTTCGTCATCAATGTATCAAGATATTATGAATCACATGCCGCTTGGACCTCACATGTAA 708 0.4675 MSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYNCTKAGCTVRKHMERASHDLKSVITTYEGKHNHDVPAARSSSHVNANASNAGQGQASGLLQNHVHRNEPSQIHNGIGRPSFGSFNLPGRQQLADLGHPHGFSFGMDQHLSNLAMSGLGSSSQAKFPVMPMNRFMAQQQNPTNEMGFMLPKGEPNVDANPERSGLNMHNGSSSMYQDIMNHMPLGPHM* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4864 235 ProSiteProfiles WRKY domain profile. 19 84 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g4864 235 PANTHER WRKY TRANSCRIPTION FACTOR 2-RELATED 3 160 - -
Tpr3g4864 235 Pfam WRKY DNA -binding domain 25 82 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g4864 235 Gene3D WRKY domain 11 77 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g4864 235 SUPERFAMILY WRKY DNA-binding domain 16 84 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g4864 235 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 3 160 IPR044810 GO:0003700
Tpr3g4864 235 SMART WRKY_cls 24 83 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4864 Tpr-Chr3 53364250 53365491 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4864 25 84 WRKY Transcription Factor Family AT5G56270 53.333 1.18e-14 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr3g4864 WRKY 2.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4864 K18835 - gmx:100796545 346.28