Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4836 ATGAATACATCTGTCAATACGTGTGAGATCGTTGAATTAAGTGAAGAGATATTTCCCGAGTTTGAAATGGGTGGAAAACCTGAGAGTAGTTGTTCCTACAAATTAGGAAAAAGGTACTCGATTGAGGATGATATTAATCGTCTTTTCCAAGCTATTGAGATTAAAAGTTCATCAAGAGGTCATAGTATATCGAGATCGCAAAAGAGTGCTCTTAAAAGACCGATCAAAGTTTGTCCGTCTCAGGCGTCTGGAATTGGCATCGCGGAGCCGGTAAGTTTGAAACAGGCACTTAGAGGATTGTGCATCTCTCAGGCATCAGAAATGGCTGCTTTGAAGAGACCATCAAAGCAATGCAGCTCGTCTAGAGTATCAGAGGTTGGCACGGTAAAAAAGTTGGTTGAAATCTCCCTAGTGCCAGAGATATCTACGCCTTCTGGTAAATTTCCCGATGTAGCAATATCAAGCTCGAGTGCTAACCATTCCATTCGCGTGGTCAATGATGCAAGCTCAAAAGAAATGACAAATAGGTTTGTATCCCGAGATCAGATCGTTCCTCTTCCACCGGAGGTTGAAGCTGGCAACACAGCAATAAGAACCGAGGAAGTGCTAGAGGTCAAAACGAATCCTGCTACCTCGAGTAAATCTTGTTTTGATTCTTCGATGCTGGATAAGGATCGAGTGGAAAATTCACATTGTGCATCTTGTCCACCTAGCACTAGAAATGATGGTGGAGTCGACAAATCCTCAAGCATTAGTACATGTTTGGCAAAGCCAATATTCAATAACATGAACTTTTTTAAGAAAAAGGTAAAAAAAGACCTATGTTCTGCCTCGAGCTGCGCTACTAGTAGTTCTGACAAGGGGAGTGGAAATTCTGATCTTAAGCATGAAGTGAAAGAAAATGATAAACAATCTACGTGCAGTTCGAATCATAGCATTGAAGTTAACTCAGTTAATGTTAGTAGAGATTCAAGTAAACCTAGTTCTAGTTTGAATTGCAATAAGAAAACTAAGTTTCTTGTTACAAAAGTTGATGAAAAATCAAGATCGAAGGAAAAGGGCGAGTTCTCGCAGAGCTCAAAAAGTAGCATGGGTGAGTATAGTACTAGTAGCACAAGCATCAGTGAGGAGAGCAATCTTAGCAGTTCAAATCGCAGTGGACAACGACCACACATGTCAAAGCACTCGAGATGGGAAGCTATTCGAGCAGTTCAACAGCAGCATGGTAACTTAAATTTGAGGCATTTCAGGATGCGAAGGAAGATCGGTAGTGGAGACATCGGAACTGTTTATCTTGCAGAACTAATTGGTACTAGCTGCTTTTTTGCATTGAAAGTTATGGACAATGAATTTTTGGCTAGCAGGAAGAAAACATTTAGGGTCCAAACTGAAAGAGAGATCCTTCAAATGCTGGATCATCCATTTCTTCCTACACTTTATTCGTATATCAATACGGATAAGCTCTCTTGCTTGGTCATGGAGTATTGTCCGGGCGGTGATCTGCATGTGCTGCGACAGAGGCAAACATACAAGAGCTTTTCGGAGCAAGCATCTAGGTTTTATGTTGCTGAAGTTCTTCTCGCCCTTGAGTATTTGCACATGATGGGAGTTGTATATCGAGATCTAAAGCCGGAAAATATCTTAGTACGCGAAGATGGACACATTATGCTGACAGATTTTGACTTGTCACTCAGATGTTCTGTTAATCCAATGTTAGTCAAATCATCTTCACCCGAAGCAGATGCGACAAAGAAGATCTCCAGTCCTTGTTCAGGGGCTAGCTGCATACACCCTTTTTGTCTCCAACCAGATTGGCAAGTTTCGTGCTTTACTCCTATTCTACTGTCTCCCGGAGCGAAATCTCGGAAGATGAAGGCTGACATAAGTGCTCAAGTTGGTCCACTGCCACAGCTTGTAGTTGAGCCTACCGAAGCACGGTCCAACTCATTCGTTGGAACGTACGAATATCTAGCTCCAGAGATCATCAAAGGTGAGGGACATGGGAATGCTGTAGATTGGTGGACTTTCGGTATACTTTTGTTTGAGCTTTTATACGGAAAAACTCCATTCAAAGGTCCATCAAATGATGATACATTATCCAACATCGTGTCGCAGAGCCTTAAGTTTCCAGGCACTCCTATAGTCAGTTTTCATGCAAGAGATTTGATCAGAGGATTGTTGATAAAGGATCCTGAAAATCGATTAGGTTCAATAAAAGGTGCTGCGGAAATTAAACAGCACCCTTTCTTCGTTAACCTCAACTGGGCTCTAATACGGTGTGCAGCACCACCGGAGCTCCCTAAGTTTCGCGATTTTGGAACTAGTGCTTCATCTATGGCTACACATAAGGAGAATGCAAATGATTTAGAGGATATAGATGATTGTGAAGAGTTTGAGCTGTTTTAG 2406 0.4185 MNTSVNTCEIVELSEEIFPEFEMGGKPESSCSYKLGKRYSIEDDINRLFQAIEIKSSSRGHSISRSQKSALKRPIKVCPSQASGIGIAEPVSLKQALRGLCISQASEMAALKRPSKQCSSSRVSEVGTVKKLVEISLVPEISTPSGKFPDVAISSSSANHSIRVVNDASSKEMTNRFVSRDQIVPLPPEVEAGNTAIRTEEVLEVKTNPATSSKSCFDSSMLDKDRVENSHCASCPPSTRNDGGVDKSSSISTCLAKPIFNNMNFFKKKVKKDLCSASSCATSSSDKGSGNSDLKHEVKENDKQSTCSSNHSIEVNSVNVSRDSSKPSSSLNCNKKTKFLVTKVDEKSRSKEKGEFSQSSKSSMGEYSTSSTSISEESNLSSSNRSGQRPHMSKHSRWEAIRAVQQQHGNLNLRHFRMRRKIGSGDIGTVYLAELIGTSCFFALKVMDNEFLASRKKTFRVQTEREILQMLDHPFLPTLYSYINTDKLSCLVMEYCPGGDLHVLRQRQTYKSFSEQASRFYVAEVLLALEYLHMMGVVYRDLKPENILVREDGHIMLTDFDLSLRCSVNPMLVKSSSPEADATKKISSPCSGASCIHPFCLQPDWQVSCFTPILLSPGAKSRKMKADISAQVGPLPQLVVEPTEARSNSFVGTYEYLAPEIIKGEGHGNAVDWWTFGILLFELLYGKTPFKGPSNDDTLSNIVSQSLKFPGTPIVSFHARDLIRGLLIKDPENRLGSIKGAAEIKQHPFFVNLNWALIRCAAPPELPKFRDFGTSASSMATHKENANDLEDIDDCEEFELF* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4836 801 SUPERFAMILY Protein kinase-like (PK-like) 389 772 IPR011009 -
Tpr3g4836 801 MobiDBLite consensus disorder prediction 305 331 - -
Tpr3g4836 801 Gene3D Transferase(Phosphotransferase) domain 1 644 768 - -
Tpr3g4836 801 PANTHER FLIPPASE KINASE 1-RELATED 1 798 - -
Tpr3g4836 801 ProSiteProfiles Protein kinase domain profile. 416 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4836 801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 537 549 IPR008271 GO:0004672|GO:0006468
Tpr3g4836 801 MobiDBLite consensus disorder prediction 344 396 - -
Tpr3g4836 801 MobiDBLite consensus disorder prediction 290 304 - -
Tpr3g4836 801 Gene3D Phosphorylase Kinase; domain 1 414 495 - -
Tpr3g4836 801 SMART serkin_6 416 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4836 801 CDD STKc_phototropin_like 414 773 - -
Tpr3g4836 801 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL1 ISOFORM X1 1 798 - -
Tpr3g4836 801 Gene3D Transferase(Phosphotransferase) domain 1 496 565 - -
Tpr3g4836 801 MobiDBLite consensus disorder prediction 357 389 - -
Tpr3g4836 801 MobiDBLite consensus disorder prediction 286 331 - -
Tpr3g4836 801 Pfam Protein kinase domain 418 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4836 801 Pfam Protein kinase domain 647 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4836 Tpr-Chr3 53186129 53190185 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4836 296 801 AGC Kinase Gene Family AT3G52890 61.122 0.0 636
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Tpr3g4836 Pkinase 3.5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4836 - - gmx:100784955 1179.47