Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4822 ATGTCACCACCATTTTCCCTCACTCTTTCTCTTCTCTTTTTCATCCTCTTAGCACCATTGTTACTCCTAGCTCAATCTCCTCCCCCTTCACCTTCTAATTCTTCGTCTGCCGCGTGCAAAGCGACATTGTACCCGAAACTATGTCGCTCGATGCTATCTACTATCCGTTCATCGCCTTCCGATCCATATAACTATGGAAAATTCTCCATAAAACAAAACCTAAAACTAACAAGAAAACTAACAAAAGTATTTTCTGATTTCCTCAAACGCCATCAATCATCTTCATCTTTAAACCATGAAGAAATTGGTGCATTAGTTGATTGCAATGACCTTAACCAACTCAATGTAGATTACTTAGAATCCATTTCTAATGAACTAAAATCAGCTAGTACTTCATTATCAGATACAGAACTTGTTGATAAAATTGAAAGCTATCTTAGTGCTGTTACTACTAATCATTATACTTGCTTTGATGGTTTAGTTGTGACAAAAAGTAACATTGCTAATGCTCTTGCTGTTCCTTTGAAAGATGCTACACAATTTTATAGTGTTTCACTTGGTTTGGTAACTGAGGCTTTGAATAAAAACATGAAAAGGAATAAGACTCGCAAACATGGTCTTCCTAATAAGTCATTCAAGGTTAGGCAACCACTTGAGAAGCTCATCAAGTATCTCCGCACAAAATATACTTGCAAAACAACATCAAATTGTACAAGTACTACAAAAACAGAAAGGATTCTTAAAGAAAGTGAAAGCCAAGGAATTCTATTAAATGATTTTGTGATTGTGAGTCCTTATGGAATAGCAAACCACACTTCCATTGGTGATGCTATTGCTTCTGCACCAAATAACACAAAGCCACAAGATGGTTATTTTCTTATCTATGTTAGAGAAGGATACTATGAGGAATATGTAATTGTTCCTAAAGAAAAGAAGAATATTCTTCTAGTTGGAGATGGTATTAACAAGACAATTATCACAGGGAATCATAGTGTTATTGATGGTTGGACAACTTTCAATTCTTCAACCTTTGCTGTTTCTGGTGAAAGATTTATAGCAGTGGACATTACATTCAAAAACACAGCTGGTCCTGAAAAACATCAAGCAGTAGCAGTGAGAAACAACGCCGACCTCTCAACATTCTACCGATGCAGTTTCGAAGGATATCAAGACACACTTTATGTTCACTCATTAAGACAATTCTATAGAGATTGCAAAATCTATGGCACGGTCGACTTCATATTCGGCAACGCAGCTGTAGTTTTCCAGAATTGCAACATCTATGCTAGAAAACCAATGCAAAATCAGAAAAATGCTGTCACAGCACAAGGTAGAACTGATCCAAATCAAAACACTGGAATTTCAATCCAAAACTGTACTATTGATGCTGCACCTGATTTAGCTAATGACTTGAATTCGACATCGAGTTACTTAGGTAGACCATGGAAGATTTATTCAAGAACTGTTTATATGCAATCATATATTGGTGATTTTGTTGATCCTTCTGGTTGGTTAGAATGGAATGGAACACTTGGATTAGACACTATATTTTATGGTGAATATGATAACTATGGACCTGGTTCTAAAATTGATAATAGGGTTCAATGGCCTGGTTATTTTCTTTTGAATGATACTCAAGCTTGGAATTTCACTGTTCTTAATTTTACTTTGGGAAATACTTGGCTTCCTGATACAGATATACCTTACACTGAAGGGTTATTGAAGTAG 1728 0.3582 MSPPFSLTLSLLFFILLAPLLLLAQSPPPSPSNSSSAACKATLYPKLCRSMLSTIRSSPSDPYNYGKFSIKQNLKLTRKLTKVFSDFLKRHQSSSSLNHEEIGALVDCNDLNQLNVDYLESISNELKSASTSLSDTELVDKIESYLSAVTTNHYTCFDGLVVTKSNIANALAVPLKDATQFYSVSLGLVTEALNKNMKRNKTRKHGLPNKSFKVRQPLEKLIKYLRTKYTCKTTSNCTSTTKTERILKESESQGILLNDFVIVSPYGIANHTSIGDAIASAPNNTKPQDGYFLIYVREGYYEEYVIVPKEKKNILLVGDGINKTIITGNHSVIDGWTTFNSSTFAVSGERFIAVDITFKNTAGPEKHQAVAVRNNADLSTFYRCSFEGYQDTLYVHSLRQFYRDCKIYGTVDFIFGNAAVVFQNCNIYARKPMQNQKNAVTAQGRTDPNQNTGISIQNCTIDAAPDLANDLNSTSSYLGRPWKIYSRTVYMQSYIGDFVDPSGWLEWNGTLGLDTIFYGEYDNYGPGSKIDNRVQWPGYFLLNDTQAWNFTVLNFTLGNTWLPDTDIPYTEGLLK* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4822 575 Pfam Plant invertase/pectin methylesterase inhibitor 36 187 IPR006501 GO:0004857
Tpr3g4822 575 PANTHER PECTINESTERASE 9 573 - -
Tpr3g4822 575 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 190 IPR035513 -
Tpr3g4822 575 Gene3D - 259 575 IPR012334 -
Tpr3g4822 575 PANTHER PECTINESTERASE 9 573 - -
Tpr3g4822 575 ProSitePatterns Pectinesterase signature 2. 407 416 IPR033131 -
Tpr3g4822 575 Pfam Pectinesterase 261 558 IPR000070 GO:0030599|GO:0042545
Tpr3g4822 575 SUPERFAMILY Pectin lyase-like 259 572 IPR011050 -
Tpr3g4822 575 CDD PMEI-like_3 37 191 - -
Tpr3g4822 575 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 192 IPR035513 -
Tpr3g4822 575 SMART PMEI_2 30 188 IPR006501 GO:0004857
Tpr3g4822 575 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 181 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4822 Tpr-Chr3 53074345 53078914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4822 38 574 Carbohydrate Esterase AT3G10720 62.292 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4822 K01051 - gmx:100816503 930.628