Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4820 ATGGGGTCTCAAGTTGTTGGCGATAACAATGAAAACCATTCGGAATTCCAGCCTTTGGCACGGCAAAACTCAATGTACAATCTTACCCTTGATGAAGTTGAGAGTCAATTAGGTGACTTGGGAAAGCCGCTAAGTAGTATGAACCTTGACGAGCTTCTAAAAAGTGTATGGACTGTTGAGACAAACCAATCCATTTGTATGGAAAATGAGAACGTAGCTCAAAACGAACAAGTTGTTTTCCAACATCAGCCTAATCTATCGTTAAACAGTGCATTAAGCAAGAAGACAGTTGATGAGGTTTGGAGAGATATCCAGCAAAACAAAGGTGAAAGGGAGATGAATTCTCAAGAGAGACAATCTACTTTGGGAGAGATGACATTAGAGGATTTTTTGGTGGAAGCAGGCGTCGTTTCGGTTGCATCTTCTAATAGAAGGAATACTAATGATCTTAAAGTTGGCGTTGTTGATTCAAATGTACCGCTACTGCAGTTTGCGCCGCATGGTCCATGGATACAATATGCACAGCCACATTTTCAGCATCCACAACAAAGTGTGGTGGCGGCTTATGTTCCGGGCCAAATCATAGCACAGCCGTTGCACATGGCAGCCGGTGCTCCATTGGATGTTGTTCAATATGCAGATGGTCAGGTGGCGATGGCTGCACCCATGATGGGAAACTTATCTGATGAAAAGAAATCTGCTAGAAAACGGGGACCAGATGACATGGTAGAGAGGACTGTCGAGAAAAAGCAGAAGAGGATGATCAAGAACCGGGAATCTGCTGCGCGCTCAAGAGCAAGAAAACAGGCATACACAACTGAATTGGAGGTCAAAGTCTCGCGTCTGGAAGAGGAAAATGAAAAGCTGAGGAAGGAGAAGGAGCTTGTGAACATGTTAGCCAATGCTCCACCGCCCGAGCCTAAGTGTCAGCTTCGCCGCGTATCATCGGCTACATTCTGA 960 0.451 MGSQVVGDNNENHSEFQPLARQNSMYNLTLDEVESQLGDLGKPLSSMNLDELLKSVWTVETNQSICMENENVAQNEQVVFQHQPNLSLNSALSKKTVDEVWRDIQQNKGEREMNSQERQSTLGEMTLEDFLVEAGVVSVASSNRRNTNDLKVGVVDSNVPLLQFAPHGPWIQYAQPHFQHPQQSVVAAYVPGQIIAQPLHMAAGAPLDVVQYADGQVAMAAPMMGNLSDEKKSARKRGPDDMVERTVEKKQKRMIKNRESAARSRARKQAYTTELEVKVSRLEEENEKLRKEKELVNMLANAPPPEPKCQLRRVSSATF* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4820 319 MobiDBLite consensus disorder prediction 297 319 - -
Tpr3g4820 319 CDD bZIP_plant_BZIP46 249 295 - -
Tpr3g4820 319 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 317 IPR043452 GO:0003700|GO:0045893
Tpr3g4820 319 Coils Coil 272 302 - -
Tpr3g4820 319 Gene3D - 247 301 - -
Tpr3g4820 319 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 252 267 IPR004827 GO:0003700|GO:0006355
Tpr3g4820 319 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 247 292 IPR004827 GO:0003700|GO:0006355
Tpr3g4820 319 PANTHER BZIP TRANSCRIPTION FACTOR 2 317 - -
Tpr3g4820 319 Pfam bZIP transcription factor 249 294 IPR004827 GO:0003700|GO:0006355
Tpr3g4820 319 SUPERFAMILY Leucine zipper domain 249 296 IPR046347 GO:0003700|GO:0006355
Tpr3g4820 319 SMART brlzneu 245 302 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4820 Tpr-Chr3 53052092 53053907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4820 17 319 bZIP Transcription Factor Family AT3G56850 50.974 5.98e-81 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr3g4820 bZIP_1 2.3e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4820 K14432 - gmx:100784924 410.609